ERISdb: a Database of Plant Splice Sites

General
Orthologs
EST
RNA-Seq
PPT, BS, UA-tract

Sequence

atgc intronic sequence ATGC exonic sequence

...ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagtgacgtgtggcttgttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC

Basic information

species	Physcomitrella patens
transcript	PP1S38_194V6.1
intron #	1
splice site	3'
intron type	U2

Orthologous splice sites

atgc intronic sequence ATGC exonic sequence

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: LOC_Os05g30530.1 (Oryza sativa), 3'ss of exon 1

-ttatcggtttacgtaaactt-gctttacttgtacgaagagtgcgtttgttcctgagtgacgtgtggcttgttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
 |||  |  || |      ||   ||  ||  |  | |  |       | |    |      | |  |||||||  |   |||    || |    |   |||||  | ||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||| | ||||| || || 
tttactgtattgcccccttttcatttctctcatttggattggttaaacgctatcaatatgtatttatcttgttaaaag--aatctccttttctgcttaatagGCGAGGGGTTTGAAGAAGCATCTGAAGAGGCTCAATGCCCCCAGCCATTGGATGCTTGACAAGCTTGGTGGAGCATTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: LOC_Os02g01560.1 (Oryza sativa), 3'ss of exon 1

ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagtgacgt-gtggcttgttacgaactaattgttttct-----tgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
        ||  |    | |  | |  |||||   |    | | |   ||   ||| | || ||   ||||   || |   |  |||||       ||    | ||||  | ||||||||||||||| |||||||||||||||| ||||  ||||||||||| |||||| | ||||| || || 
-----accttgtgatttcattgtgtcattgtattcatgtcgtgct-actctgcagttatgttgttatttgtgctgatcatttccttttcccttaccgtaataccagGCAAGGGGTTTGAAGAAGCATCTGAAGAGGCTCAATGCGCCCAAGCATTGGATGCTCGACAAGCTTGGTGGAGCTTTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: LOC_Os01g25610.1 (Oryza sativa), 3'ss of exon 1

----ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagtgacgtgtggcttgttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
    ||||    ||       |||  || |   | |  |  | |  ||  ||   ||  | |       |||        | |  |||| | || ||     ||||  | || |||||||||||| | |||||||||||||| ||||  || |||||||| |||||| | || || || || 
agaattatattgttgtactggctt--ttaagaagcatcacaattctgtgagtatgtggttaataacatacttaacgttgtcaacctgttattttctgaac--agGCGAGGGGATTGAAGAAGCATCTCAAGAGGCTCAATGCGCCCAAGCACTGGATGCTCGACAAGCTCGGCGGAGCTTTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G125271_T01 (Zea mays), 3'ss of exon 1

--------ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagtgacgtgtggcttgttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
          |||   || ||| || |    || |     | | ||   |  ||| |     |  |  ||| |    || |  |  | |  |||| |||    || ||||| | || ||||||||||||||||||||||||||||| ||||  ||||||||||| |||||| | || || || || 
ttgagaaggaatca--ttccgtgaaatcaggttgcgatgcctatgataacacttgct-----ggaatctgttgtgcttttctgatcactgttttttttgcaa-tccagGCTAGAGGATTGAAGAAGCATTTGAAGAGGCTCAATGCCCCCAAGCATTGGATGCTGGACAAGCTTGGCGGAGCTTTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G158584_T04 (Zea mays), 3'ss of exon 5

ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagtg--acgtgtggcttgttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
 | |   |||    |  ||      |  || | ||        |   ||||  | ||  |  ||| ||   ||      | ||| || | |||    || ||||| | || ||||||||||| ||||||||||||||||| ||||  ||||||||||| |||||| | || || || || 
ctgttacttttaacag-ctaatgcaatctggatgagtcacctatgaattccatactggaatctgttgcgcttttgttgatcattattattttgcaa-tccagGCTAGGGGATTGAAGAAGCACTTGAAGAGGCTCAATGCGCCCAAGCATTGGATGCTCGACAAGCTTGGCGGAGCTTTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G469061_T01 (Zea mays), 3'ss of exon 2

ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagtg--acgtgtggcttgttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
 | |   |||    |  ||      |  || | ||        |   | ||  | ||  |  ||| ||   ||      | ||| || | |||    || ||||| | || ||||||||||| ||||||||||||||||| ||||  ||||||||||| |||||| | ||||| || || 
ctgttacttttaacag-ctaatgcaatctggatgagtcacctatgaatgccatactggaatctgttgcgcttttgttgatcattattattttgcaa-tccagGCTAGGGGATTGAAGAAGCACTTGAAGAGGCTCAATGCGCCCAAGCATTGGATGCTCGACAAGCTTGGTGGAGCTTTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G176641_T01 (Zea mays), 3'ss of exon 3

ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagtg--acgtgtggcttgttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
 | |   |||    |  ||      |  || | ||        |   | ||  | ||  |  ||| ||   ||      | ||| || | |||    || ||||| | || ||||||||||| ||||||||||||||||| ||||  ||||||||||| |||||| | || || || || 
ctgttacttttaacag-ctaaagcaatctggatgagtcacctatgaatgccatactggaatctgttgcgcttttgttgatcattattattttgcaa-tccagGCTAGGGGATTGAAGAAGCACTTGAAGAGGCTCAATGCGCCCAAGCATTGGATGCTCGACAAGCTTGGCGGAGCTTTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G158584_T05 (Zea mays), 3'ss of exon 1

ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagtg--acgtgtggcttgttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC----------------------
 | |   |||    |  ||      |  || | ||        |   ||||  | ||  |  ||| ||   ||      | ||| || | |||    || ||||| | || ||||||||||| ||||||||||||||||| ||||  ||||||||||| |||||| | || || || ||                       
ctgttacttttaacag-ctaatgcaatctggatgagtcacctatgaattccatactggaatctgttgcgcttttgttgatcattattattttgcaa-tccagGCTAGGGGATTGAAGAAGCACTTGAAGAGGCTCAATGCGCCCAAGCATTGGATGCTCGACAAGCTTGGCGGAGCTTTTGTAAGTAAAAAATATTTTCTAG

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G035017_T01 (Zea mays), 3'ss of exon 1

ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagt--gacgtgtggcttgttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
 | |   |||    |  ||      |   | | ||   |    |   | ||  | |   |  ||| |    ||      | ||| || | |||    || ||||| | || ||||||||||| ||||||||||||||||| ||||  ||||||||||| |||||| | || || || || 
ctgttacttttaacag-ctgatgcaatcaggatgagtcgcctatgaatgccccactcgaatctgttgtgcttttgttgatcattattattttgcaa-tccagGCTAGGGGATTGAAGAAGCACTTGAAGAGGCTCAATGCGCCCAAGCATTGGATGCTCGACAAGCTTGGCGGAGCTTTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G301096_T01 (Zea mays), 3'ss of exon 2

ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagtg--acgtgtggcttgttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
 | |   |||    |  ||      |  || | ||        |   | ||  | ||  |  ||| ||   ||      | ||| || | ||     |||||||| | || ||||||||||| ||||||||||||||||| ||||  |||||||||||  ||||| | ||  | || || 
-tgttacttttaacag-ctaatgcaatctgaatgagtcacctatgaatgccatactggaatttgttgcgcttttgttgatcattattatttttacaatctagGCTAGGGGATTGAAGAAGCACTTGAAGAGGCTCAATGCGCCCAAGCATTGGATGCTCAACAAGCTTGGCAGAGCTTTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G542753_T01 (Zea mays), 3'ss of exon 5

ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagtg--acgtgtggcttgttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
 | |   |||    |  ||      |  || | ||        |   | ||  | ||  |  ||| ||   ||      | ||| || | |||    || ||||| | || | ||||||||| ||||||||||||||||| ||||  ||||||||||| |||||| | || || || || 
ctgttacttttaacag-ctaatgcaatctggatgagtcacctatgaatgccatactggaatctgttgcgcttttgttgatcattattattttgcaa-tccagGCTAGGGGATCGAAGAAGCACTTGAAGAGGCTCAATGCGCCCAAGCATTGGATGCTCGACAAGCTTGGCGGAGCTTTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G159228_T01 (Zea mays), 3'ss of exon 1

ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagtg--acgtgtggcttgttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
 | |   |||    |  ||      |  || | ||        |   | ||  | ||  |  ||| ||   ||      | ||| || | |||    || ||||| | || ||||||||||| |||||||| |||| ||||||||  ||||||||||| |||||| | || || || || 
ctgttacttttaacag-ctgatgcaatctggatgagtcacctatgaatgccatactggaatctgttgcgcttttgttgatcattattattttgcaa-tccagGCTAGGGGATTGAAGAAGCACTTGAAGAGCCTCAGTGCTCCCAAGCATTGGATGCTCGACAAGCTTGGCGGAGCTTTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G060986_T01 (Zea mays), 3'ss of exon 5

ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagtg--acgtgtggcttgttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
|| |   |||    |  ||      |  || | ||        |   | ||  | ||  |  ||| ||   ||      | ||| || | |||    || ||||| | || ||||||||||| ||||||||||||||||  ||||  ||||||||||| || ||| | ||  | || || 
ttgttacttttaacag-ctaatgcaatctggatgagtcacctatgaatgccatactggaatatgttgcgcttttgttgatcattattattttgcaa-tccagGCTAGGGGATTGAAGAAGCACTTGAAGAGGCTCAATGTGCCCAAGCATTGGATGCTCGATAAGCTTGGCAGAGCTTTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GLYMA01G31270.1 (Glycine max), 3'ss of exon 1

---ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagtgacgtgtggcttgttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
    ||      | | |    | |  | | |  || ||| | || || | ||      |||| |     |   ||     || || || || ||| | || ||||  | || || ||||| ||  ||||||||||||||||||| | ||||||||||||||||||| | ||||||||||| 
ggcctacaatgattcattgcttggtgtaattgttaggaatattgagtatcttaagttctgacctcaaattc--taatttgtagtttttctcctgtatttc-agGCGAGAGGGTTAAAGAAACACCTGAAGAGGCTCAATGCTCCAAAACATTGGATGCTTGACAAGCTTGGTGGTGCCTTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GLYMA14G06170.1 (Glycine max), 3'ss of exon 1

---ttatcggtttacgta-aacttgctttacttgtacgaagagtgcgtttgttcctgagtgacgtgtggcttgttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
    || || |||   ||  | ||| | |        |  |  |   ||| ||  |   |   |  ||    | |   ||||  |    || |  |   |  ||||| | ||  | |||||||||||||| |||||||||||||| |  |||||||||||||||||  |||||||||| || 
aaactagcgttttgtatatgatttgttctttagacttgctgtttagattt-tttttattttgtgcttga---gctttaaacttttgtgcttatgattgttacagGCTAGGGGACTAAAGAAGCATTTGAAAAGGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GLYMA02G43080.2 (Glycine max), 3'ss of exon 1

---ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagtgacgtgtggcttgttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
     || |||||  || |  |    | |    | |     |    ||| |   | | |   || ||    |||   ||||       || |      |  ||||| | || |||||||||||| | ||||||||||||||||| |  |||||||||||||||||  |||||||||| || 
ctaccataggttttggtcatttaatgtcagacttgctgtttgaatctttttgtttaatttgtgtttga---gttttaaactttcgtgcttatgactgttacagGCTAGGGGATTGAAGAAGCATCTCAAGAGGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GLYMA02G05370.1 (Glycine max), 3'ss of exon 1

---ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagtgacgtgtggctt-gttacgaacta-attgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
    |   |  ||   |    ||   ||  | |     | | ||    | ||  | | | |  |||| ||  | |  |||||  | | | |  ||||  |   ||||  | || ||||||||||||||||||||||| ||||| || |  |||||||||||||||||  |||||||||| || 
gtaatgctgagttttatttgttta--ttgttagacttgatattgaaggtttttttaattaatttgtgtctgagctttgaacttcaatatatgattgtaac---agGCGAGAGGATTGAAGAAGCATTTGAAGAGGCTTAATGCCCCAAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GLYMA03G06440.1 (Glycine max), 3'ss of exon 1

--ttatcggtttacgtaaact-tgctttacttgtacgaagagtgcgtttgttcctgagtgacgtgtggcttgttacgaactaattg-ttttcttgtgt-ctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
  | ||  |||   ||   |  || | || ||||  | |   |  | |   || | |||   |||    |   | | || |  | | |||||| ||||  |  ||||  | || |||||||| || |||||||||||||||||||| | ||| ||||||||||||||| | ||||| ||||| 
aatgattcgtt-gtgtggtcagtggtgtatttgttaggaatatatggta--tcttaagt--tgtgaccttaaattctaatttgtagcttttctcgtgtatttcagGCGAGAGGGTTGAAGAAACACTTGAAGAGGCTCAATGCTCCAAAACACTGGATGCTTGACAAGCTTGGTGGGGCCTTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GLYMA16G23730.1 (Glycine max), 3'ss of exon 1

ttatcggtttacgtaaact-tgctttacttgtacgaagagtgcgtttgttcctgagtgacgtgtggctt-gttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
     | ||||  |      || |  | |||       ||    ||| ||  | | | |  | ||  |  | |  |||||  |   ||| |  |      ||||  | || || ||||||||| |||||||||| ||||| || |  |||||||||||||||||  |||||||||| || 
cccgagttttatttgtttagtgttagatttgatattcaagattttttatttttaattaatttttgtttgagctttgaact--tcaatttatgattgtaacagGCGAGAGGATTAAAGAAGCATCTGAAGAGGCTTAATGCCCCAAAGCATTGGATGCTTGACAAACTGGGTGGTGCATTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: Vv08s0058g00390.t01 (Vitis vinifera), 3'ss of exon 2

---ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagtgacgtgtggcttgttacgaactaattgttttcttg-tgt-ctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
   | |     | |  |  |  ||   |  |||||    |  |   ||||||  |     || | |   ||| |  |||||  ||||  | | | ||   |  ||||| | || |||||||| |||||||||||||||||||| || |  |||||||||||||||||| | || ||||| || 
gtatgaaaatatgatttggaactgtgatttttgtaatctgccttt-tttgtttttc--caacatttttattgct--gaacttcttgtcatgtgggtgcattacagGCTAGAGGGTTGAAGAAACATTTGAAGAGGCTCAATGCCCCTAAGCATTGGATGCTTGACAAGCTTGGAGGTGCATTT

upper sequence: PP1S38_194V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: Vv06s0004g07150.t01 (Vitis vinifera), 3'ss of exon 1

ttatcggtttacgtaaacttgctttacttgtacgaagagtgcgtttgttcctgagtgacgtgtggcttgttacgaactaattgttttcttgtgtctcta--gGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC
  |  |  ||||   ||  |  |  |  ||  |      |  ||||   | |   |   ||   | | ||| |  |     |   || |||  ||  ||  ||| || || || ||||| |||||||||||||| ||||| || |  |||||||||||||||||  | || ||||| || 
-gaatgacttacaagaatat-ttgaatgtgaccttcatattagtttccccatttttcttgttctgttggttgctgaacctctacatttttggctcattacagGCACGAGGGTTAAAGAAACATTTGAAGAGGCTTAATGCCCCAAAGCATTGGATGCTTGACAAACTTGGGGGTGCATTT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments

ATGC    EST sequence
ATGC    genomic sequence (exon)
ATGC    genomic sequence (truncated intron)

EST: gi|162203305|gb|FC379584.1|FC379584

EST:     GATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: GATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162233566|gb|FC410948.1|FC410948

EST:     GGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: GGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162203574|gb|FC379060.1|FC379060

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162249702|gb|FC426816.1|FC426816

EST:     GCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: GCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|67577870|gb|BJ950037.1|BJ950037

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162272443|gb|FC449069.1|FC449069

EST:     CCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: CCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162258650|gb|FC434345.1|FC434345

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|67578018|gb|BJ950185.1|BJ950185

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|18358480|gb|BJ190539.1|BJ190539

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162266614|gb|FC441987.1|FC441987

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|18361783|gb|BJ193850.1|BJ193850

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162207153|gb|FC382475.1|FC382475

EST:     GCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: GCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162180495|gb|FC356137.1|FC356137

EST:     CATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: CATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|67578208|gb|BJ950375.1|BJ950375

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACNTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|100436063|gb|BY979361.1|BY979361

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162276836|gb|FC452518.1|FC452518

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|18359386|gb|BJ191447.1|BJ191447

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|67569136|gb|BJ941960.1|BJ941960

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162277227|gb|FC453657.1|FC453657

EST:     ATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: ATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162258810|gb|FC434817.1|FC434817

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|18329502|gb|BJ161508.1|BJ161508

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|67571902|gb|BJ944726.1|BJ944726

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|18344088|gb|BJ176127.1|BJ176127

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162272521|gb|FC448511.1|FC448511

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|18329501|gb|BJ161507.1|BJ161507

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|18327151|gb|BJ159152.1|BJ159152

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|18372500|gb|BJ204102.1|BJ204102

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|18328914|gb|BJ160920.1|BJ160920

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|208377280|gb|DC902761.1|DC902761

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162235887|gb|FC411630.1|FC411630

EST:     TCTTGTCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162264651|gb|FC441649.1|FC441649

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162201548|gb|FC377430.1|FC377430

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|67702402|gb|BJ962635.1|BJ962635

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|18349789|gb|BJ181839.1|BJ181839

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCNGCTGCAACCATG                         GCTCGCGGTTTGAAGAANCATTTGAAGAGGCTCAATGCTCCCANACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|18342475|gb|BJ174510.1|BJ174510

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|18350628|gb|BJ182679.1|BJ182679

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162274060|gb|FC450132.1|FC450132

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162219346|gb|FC395342.1|FC395342

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|18345618|gb|BJ177661.1|BJ177661

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|18374816|gb|BJ206394.1|BJ206394

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|67576103|gb|BJ948927.1|BJ948927

EST:     CCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: CCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|18371782|gb|BJ203384.1|BJ203384

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAANCATTTGAAGANGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|67716696|gb|BJ966956.1|BJ966956

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|18364145|gb|BJ196218.1|BJ196218

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|18332276|gb|BJ164289.1|BJ164289

EST:     TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162201160|gb|FC377667.1|FC377667

EST:     GATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: GATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|19786886|gb|BQ040554.1|BQ040554

EST:     TCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: TCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162208796|gb|FC384932.1|FC384932

EST:     CTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: CTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

EST: gi|162203095|gb|FC380167.1|FC380167

EST:     CTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATG                         GCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG
genomic: CTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGG

RNA-Seq data

ATGC Supported by RNA-Seq exonic block that spans over the splice site

atgs Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.

Found data for 1 RNA-Seqlibrary.

Block sizes: 34 (upstream exon), 34 (downstream exon)
Score: 48

CAGCTCTCTTTCAAGCTTGCCTGTCTCGCGCCGGAGCTTGTCTTGCCCATCTCTCTGTGCTGATCGCCTCACACTTCGGCTGCAACCATGgtgagttttc ... gtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC

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atgc intronic sequence ATGC exonic sequence

Intronic sequence truncated to 55 bases.

tgttcctgagtgacgtgtggcttgttacgaactaattgttttcttgtgtctctagGCTCGCGGTTTGAAGAAGCATTTGAAGAGGCTCAATGCTCCCAGACATTGGATGCTTGACAAGTTGGGTGGTGCCTTC