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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacgtgccctgcttcgccgcgttctcacgtcgagccgctacccttgcaagcaattcttgtatgtttggtaccattttcgacttacattgtgctcttcttttgttgggttttgttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTCAAGTACAAACGAAGGAGAG

Basic information

species Physcomitrella patens
transcript PP1S364_3V6.1
intron # 1
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208392289|gb|DC904191.1|DC904191
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208352416|gb|DC902033.1|DC902033
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|18373659|gb|BJ205237.1|BJ205237
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208394341|gb|DC904161.1|DC904161
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208358483|gb|DC930615.1|DC930615
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|162192029|gb|FC367242.1|FC367242
EST:     GCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208385591|gb|DC937136.1|DC937136
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|18372950|gb|BJ204552.1|BJ204552
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|7148077|gb|AW509999.1|AW509999
EST:     GTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208348498|gb|DC913212.1|DC913212
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|100390598|gb|BY971353.1|BY971353
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|162262376|gb|FC437703.1|FC437703
EST:     CGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: CGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|162212495|gb|FC388743.1|FC388743
EST:     GGTCGCCGTTCTCGCTCTGTCATTTCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|162204439|gb|FC381667.1|FC381667
EST:     CGCCGTTCTCGCTCTGTCATTTCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: CGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208363582|gb|DC939773.1|DC939773
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208360661|gb|DC930472.1|DC930472
EST:     GTCGCCGATTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GTCGCCG-TTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|7047304|gb|AW477198.1|AW477198
EST:     CTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: CTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208352316|gb|DC906141.1|DC906141
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|100359876|gb|BY947166.1|BY947166
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208366757|gb|DC931414.1|DC931414
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208353196|gb|DC913912.1|DC913912
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208375394|gb|DC940476.1|DC940476
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208354578|gb|DC934278.1|DC934278
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208377680|gb|DC932216.1|DC932216
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208390467|gb|DC933724.1|DC933724
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|18362015|gb|BJ194082.1|BJ194082
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|18343623|gb|BJ175661.1|BJ175661
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208356166|gb|DC957326.1|DC957326
EST:     CTCGCCCAGNTATG                         GCTTTCATCAAGCCTAACAAGANTAAGGCCTACTTCNAGAGGTTTCAGGTC
genomic: CTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208389865|gb|DC937696.1|DC937696
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|100386499|gb|BY951295.1|BY951295
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCTCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|162192660|gb|FC369563.1|FC369563
EST:     GGTCGCCGTTCTCGCTCTGTCATTTCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208353719|gb|DC929720.1|DC929720
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208383962|gb|DC907353.1|DC907353
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208375882|gb|DC926974.1|DC926974
EST:     GTCGCCGTTCTCGNTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTTACAAGANTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208386410|gb|DC937077.1|DC937077
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|162236592|gb|FC413167.1|FC413167
EST:     CGCTCTGTCATTTCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: CGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208359184|gb|DC934687.1|DC934687
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208358013|gb|DC943097.1|DC943097
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208363496|gb|DC939729.1|DC939729
EST:     ATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: ATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208373519|gb|DC931922.1|DC931922
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|100365590|gb|BY966672.1|BY966672
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|162278080|gb|FC453899.1|FC453899
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|162199673|gb|FC375912.1|FC375912
EST:     GGTCGCCGTTCTCGCTCTGTCATTTCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|100386004|gb|BY969943.1|BY969943
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|67702060|gb|BJ962293.1|BJ962293
EST:     GTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208385005|gb|DC903512.1|DC903512
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|100359980|gb|BY965968.1|BY965968
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|18330079|gb|BJ162085.1|BJ162085
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208358816|gb|DC942954.1|DC942954
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208379529|gb|DC911140.1|DC911140
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|18327232|gb|BJ159234.1|BJ159234
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|100394560|gb|BY989848.1|BY989848
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|100397002|gb|BY953935.1|BY953935
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|67507892|gb|BJ940768.1|BJ940768
EST:     GTCGCCGTTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GTCGCCG-TTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208387290|gb|DC933041.1|DC933041
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|18363463|gb|BJ195535.1|BJ195535
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208360123|gb|DC939162.1|DC939162
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208356956|gb|DC930014.1|DC930014
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208387826|gb|DC941395.1|DC941395
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208360868|gb|DC934764.1|DC934764
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208359984|gb|DC938977.1|DC938977
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208374667|gb|DC931992.1|DC931992
EST:     GCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208400708|gb|DC904886.1|DC904886
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208397118|gb|DC908132.1|DC908132
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208351739|gb|DC913696.1|DC913696
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208360117|gb|DC939156.1|DC939156
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208363886|gb|DC943343.1|DC943343
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208386384|gb|DC937051.1|DC937051
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208388927|gb|DC932955.1|DC932955
EST:     GTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208362258|gb|DC939682.1|DC939682
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208393361|gb|DC904021.1|DC904021
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208362169|gb|DC943554.1|DC943554
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208376740|gb|DC902935.1|DC902935
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|100353009|gb|BY945561.1|BY945561
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208390441|gb|DC933698.1|DC933698
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|100397527|gb|BY990271.1|BY990271
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208348549|gb|DC913235.1|DC913235
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|18329327|gb|BJ161333.1|BJ161333
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|100438071|gb|BY961639.1|BY961639
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208345721|gb|DC909652.1|DC909652
EST:     CGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCCACTTCAAGAGGTTTCAGGTC
genomic: CGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208374442|gb|DC940715.1|DC940715
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208399233|gb|DC912448.1|DC912448
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208371049|gb|DC931537.1|DC931537
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208390539|gb|DC937471.1|DC937471
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|100444351|gb|BY982380.1|BY982380
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208355419|gb|DC929838.1|DC929838
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208362265|gb|DC939689.1|DC939689
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|18350050|gb|BJ182101.1|BJ182101
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208389029|gb|DC937362.1|DC937362
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|100427768|gb|BY977663.1|BY977663
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|6102260|gb|AW126730.1|AW126730
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208377502|gb|DC902797.1|DC902797
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208383919|gb|DC907310.1|DC907310
EST:     CTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: CTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208354059|gb|DC930157.1|DC930157
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208385853|gb|DC932797.1|DC932797
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAGGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208361465|gb|DC930420.1|DC930420
EST:     ATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: ATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|162251030|gb|FC427152.1|FC427152
EST:     GGTCGCCGTTCTCGCTCTGTCATTTCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|162166644|gb|FC343536.1|FC343536
EST:     GTCATTTCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208385785|gb|DC932729.1|DC932729
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|100384424|gb|BY987283.1|BY987283
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|18344074|gb|BJ176113.1|BJ176113
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|18354639|gb|BJ186697.1|BJ186697
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|162214211|gb|FC390257.1|FC390257
EST:     GGTCGCCGTTCTCGCTCTGTCATTTCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|100363916|gb|BY966234.1|BY966234
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208390990|gb|DC929309.1|DC929309
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208379710|gb|DC907595.1|DC907595
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208374340|gb|DC941153.1|DC941153
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208390003|gb|DC938058.1|DC938058
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208389710|gb|DC933612.1|DC933612
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|67569852|gb|BJ942676.1|BJ942676
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208376712|gb|DC902921.1|DC902921
EST:     GGTCGCCGTTCTCGCCCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|162215443|gb|FC390508.1|FC390508
EST:     GCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208369347|gb|DC936078.1|DC936078
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208377692|gb|DC932228.1|DC932228
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTTACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|7207293|gb|AW561296.1|AW561296
EST:     TCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: TCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208389827|gb|DC937448.1|DC937448
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208392602|gb|DC933974.1|DC933974
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|162225873|gb|FC402165.1|FC402165
EST:     GGTCGCCGTTCTCGCTCTGTCATTTCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208369689|gb|DC936395.1|DC936395
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208351155|gb|DC913534.1|DC913534
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|100446212|gb|CJ970511.1|CJ970511
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|162234014|gb|FC410306.1|FC410306
EST:     GGTCGCCGTTCTCGCTCTGTCATTTCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208387882|gb|DC929226.1|DC929226
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|100372623|gb|BY948624.1|BY948624
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
EST: gi|208375702|gb|DC936642.1|DC936642
EST:     GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATG                         GCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC
genomic: GGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 34 (upstream exon), 35 (downstream exon)
Score: 43

TTCGTTGCTCCCTCTTCTGGCCCTCTCTCTGATGCGCCTCTCTGCAGGTCGCCGTTCTCGCTCTGTCATTGCTGCCTGTGAGCTCGCCCAGCTATGgtacgtgccc ... ttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTCAAGTACAAACGAAGGAGAG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtaccattttcgacttacattgtgctcttcttttgttgggttttgttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTCAAGTACAAACGAAGGAGAG
           gacttac  putative branch site (score: 43)
                                        ttttgttc  putative PPT
              ttacatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtacgtgccctgcttcgccgcgttctcacgtcgagccgctacccttgcaagcaattcttgtatgtttggtaccattttcgacttacattgtgctcttcttttgttgggttttgttcaaatcagGCTTTCATCAAGCCTAACAAGACTAAGGCCTACTTCAAGAGGTTTCAGGTCAAGTACAAACGAAGGAGAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA