1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...tgtgttcgaacctgcttaagttttgtaattgaaagctcttcattgctaggagtatatctgtagacatggtattgaataatgatactaatgtctcttgcagGAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGAGTGCTGTACAAATTCTGGCATTGTTTGACAGGCTTGATGCCGTGGATGC
species | Physcomitrella patens |
transcript | PP1S34_430V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AAGGTCGATGAGATCGTGCCTTGAGATTCTCATGTGCCAGGATGAGTGCG GAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGA
genomic: AAGGTCGATGAGATCGTGCCTTG-GATTCTCATGTGCCAGGATGAGTGCGgtagtcatcc ... tctcttgcagGAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGA
ctaggagtatatctgtagacatggtattgaataatgatactaatgtctcttgcagGAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGAGTGCTGTACAAATTCTGGCATTGTTTGACAGGCTTGATGCCGTGGATGC
tactaat putative branch site (score: 1)
tgtctctt CT-rich tract
tattgaataatgata TA-rich tract