1 5' 3' | 2 5' 3' |
...caaactgcatatgttgcagatgtctttgtgttcactttctgttgctcacgttgcgtggttctattaacgttctgaatcaagacccgacttctgcacgcagGTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCCACGAGGCCCCCGCCGCCATGATCCCCCTCATACCATGAGCTGTCCTACG
species | Physcomitrella patens |
transcript | PP1S290_16V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAG GTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCCEST: gi|18372492|gb|BJ204094.1|BJ204094
genomic: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAGgttcgatttg ... ctgcacgcagGTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCC
EST: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAG GTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCCEST: gi|18369178|gb|BJ201263.1|BJ201263
genomic: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAGgttcgatttg ... ctgcacgcagGTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCC
EST: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAG GTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCCEST: gi|18372542|gb|BJ204144.1|BJ204144
genomic: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAGgttcgatttg ... ctgcacgcagGTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCC
EST: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAG GTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCCEST: gi|18368818|gb|BJ200903.1|BJ200903
genomic: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAGgttcgatttg ... ctgcacgcagGTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCC
EST: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAG GTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCCEST: gi|18373553|gb|BJ205131.1|BJ205131
genomic: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAGgttcgatttg ... ctgcacgcagGTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCC
EST: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAG GTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCCEST: gi|18351804|gb|BJ183856.1|BJ183856
genomic: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAGgttcgatttg ... ctgcacgcagGTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCC
EST: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAG GTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCCEST: gi|18363410|gb|BJ195482.1|BJ195482
genomic: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAGgttcgatttg ... ctgcacgcagGTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCC
EST: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAG GTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCCEST: gi|18328564|gb|BJ160569.1|BJ160569
genomic: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAGgttcgatttg ... ctgcacgcagGTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCC
EST: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAG GTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCCEST: gi|18356181|gb|BJ188240.1|BJ188240
genomic: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAGgttcgatttg ... ctgcacgcagGTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCC
EST: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAG GTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCC
genomic: CTATTACCCATTCACCGACCTCTGCCTTTCACCGTGACATCATTCTACAGgttcgatttg ... ctgcacgcagGTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCC
tcacgttgcgtggttctattaacgttctgaatcaagacccgacttctgcacgcagGTGTTGATGTAGCGTGTGGATGCTTTCCCCCACAACATTGTGACCCTCGCCACGAGGCCCCCGCCGCCATGATCCCCCTCATACCATGAGCTGTCCTACG
tattaac putative branch site (score: 1)
cttctgc putative PPT
ttctattaa TA-rich tract