1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...ggtttcgaccaagaccatggactttgtgatatactgtttcgttttgatcctttgacggggtagtcgctcgaatgtaattcgtggattttgtttctcgtagCAACTGGAAAGCCTCCCTGCCATGGTTGCTGGAGTTTACTCTGACGACCCCGCAACGCAGTTGGAATCAACCACCCAATTCAGAAAGCTTCTCTCTATTG
species | Physcomitrella patens |
transcript | PP1S230_50V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TGCAGCAGCAGTTCATGCCCGCCGCGCAGACTGGCGCTGCCGAGAAGAAG CAACTGGAAAGCCTCCCTGCCATGGTTGCTGGAGTTTACTCTGACGACCCC
genomic: TGCAGCAGCAGTTCATGCCCGCCGCGCAGACTGGCGCTGCCGAGAAGAAGgtgtgtggtc ... tttctcgtagCAACTGGAAAGCCTCCCTGCCATGGTTGCTGGAGTTTACTCTGACGACCCC
gatcctttgacggggtagtcgctcgaatgtaattcgtggattttgtttctcgtagCAACTGGAAAGCCTCCCTGCCATGGTTGCTGGAGTTTACTCTGACGACCCCGCAACGCAGTTGGAATCAACCACCCAATTCAGAAAGCTTCTCTCTATTG
ctttgac putative branch site (score: 19)
ttttgtttctc putative PPT
aatgtaatt TA-rich tract