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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ctttccatcgctacaactgtgattctctcagtactcatcatcgattggagagtgtagagaatgcagcgcattgttgagagtagtttcgatgttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCCGTCGTACCTGAACGGCGAGTTCGCTGGAGACTACGGGTGGGACACCGCT

Basic information

species Physcomitrella patens
transcript PP1S1_625V6.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S1_625V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: LOC_Os03g39610.1 (Oryza sativa), 3'ss of exon 1
ctttccatcgctacaactgtgattctctcagtactcatcatcgattggagagtgtagagaatgcagcgca-ttgttgagagtagtttcgatgttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCCGTCGTACCTGAACGGCGAGTTCGCTGGAGACTACGGGTGGGACACCGCT
           |||    | |    |    |||   |  | |    | |  || || |   | ||  ||| ||| | | |      |  || |     |||||||||| ||||||| ||||||| ||||||||| || || |   |||| || |||||||||| ||| |||||| | |||||||||||||||||||| || 
----------gtacg-tagcgtacatgcatgtatatacaaacataagtactgtatatatg-tacactgcaattgctaacatacaagtatatatatgtgcagGTATGGACCTGACCGTCCCAAGTACCTGGGCCCGTTCTCGGAGCAGACGCCATCGTACCTGACCGGAGAGTTCCCGGGAGACTACGGGTGGGACACGGCG

upper sequence: PP1S1_625V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G414192_T01 (Zea mays), 3'ss of exon 1
ctttccatcgctacaactgtgattctctcagtactcat-catcgattggagagtgtagagaatgcagcgcattgttgagagtagtttcgatgttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCCGTCGTACCTGAACGGCGAGTTCGCTGGAGACTACGGGTGGGACACCGCT
        ||   |  |||   | | |    | | | |   || ||  |   |    |  | ||      | ||  | | ||  |  |     ||   |||||| ||  |||| || |||||||  || ||||| || ||||   |||| ||||||||||||| |||||||||| | || |||||||||||||||||||| 
-----gtacgtgccttctgctctccgcatgcttcccttgtgtcaatcagctcgctcgggaagtgaga---actgacgtgcgtgctggctgc-ctgctgcagGTACGGCCCTGATCGCCCCAAGTATCTTGGCCCGTTCTCCGAGCAGACGCCGTCGTACCTGACCGGCGAGTTCCCCGGCGACTACGGGTGGGACACCGCG

upper sequence: PP1S1_625V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G105518_T01 (Zea mays), 3'ss of exon 1
ctttccatcgctacaactgtgattctctcagtactcatcatcgattggagagtgtagagaatgcagcgcattgttgaga--gtagtttcgatgttgtcaca----gGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCCGTCGTACCTGAACGGCGAGTTCGCTGGAGACTACGGGTGGGACACCGCT
   | | | ||| |  ||| |   |  ||| | |   |||   |  |||||| ||   || ||      | ||        |||   |   || ||   ||    |||| |   ||||||| ||||||| ||| | ||| || ||||   ||||  ||||||||||||  ||||||||| | || |||||||||||||||||||| 
--gtacgt-gctcc--ctgcgccgcattcatt-cgtgtcactaagaggagag-gtgaggactgtgagtaactgacagacacgtacgctgactgctgctgcatgcagGTACGACCCTGACCGCCCCAAGTACCTTGCCCCGTTCTCCGAGCAGACGTCGTCGTACCTGACGGGCGAGTTCCCCGGCGACTACGGGTGGGACACCGCG

upper sequence: PP1S1_625V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: EFJ11993 (Selaginella moellendorffii), 3'ss of exon 1
-----ctttccatcgctacaactgtgattctctcagtactcatcat-cgattggagagtgtagagaatgcagcgcattgttgagagtagtttcgatgttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCCGTCGTACCTGAACGGCGAGTTCGCTGGAGACTACGGGTGGGACACCGCT
     || | ||  |||   || ||   |  ||  ||  ||  ||  | |||        | |||          ||  | |    ||  || | |||   |||||||||||  | |||||||| |||||||| |||||||| ||||   |||| || || ||||| | |||||||||  |||| |||||||| ||||| ||||| 
tcgagctcttcaaagctc--acagtcgctgacttggttgtctccacaccatt----tccttcgagctcttgaaagatcatagtcgctaactttgttgtatccacagGTATGGTCCAGACCGACCAAAGTTCCTCGGCCCCTTCTCCGAGCAGACACCCTCCTACCTCACCGGCGAGTTTCCTGGCGACTACGGCTGGGATACCGCG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|67703512|gb|BJ963745.1|BJ963745
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|67709751|gb|BJ965567.1|BJ965567
EST:     GTCACCATGCGTCGAACCNTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCNAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162230259|gb|FC406615.1|FC406615
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|67703324|gb|BJ963557.1|BJ963557
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|67507800|gb|BJ940677.1|BJ940677
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162260164|gb|FC436299.1|FC436299
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162262453|gb|FC439496.1|FC439496
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162205387|gb|FC382096.1|FC382096
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162186648|gb|FC363620.1|FC363620
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|67575254|gb|BJ948078.1|BJ948078
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|18326211|gb|BJ158210.1|BJ158210
EST:     GTCATCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162265786|gb|FC442373.1|FC442373
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162213474|gb|FC389151.1|FC389151
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|18326221|gb|BJ158220.1|BJ158220
EST:     GTCATCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGNATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162218722|gb|FC394272.1|FC394272
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|208353200|gb|DC910167.1|DC910167
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162238482|gb|FC414594.1|FC414594
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162279063|gb|FC455402.1|FC455402
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162182364|gb|FC357235.1|FC357235
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162255046|gb|FC430919.1|FC430919
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162206005|gb|FC382790.1|FC382790
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162239820|gb|FC415659.1|FC415659
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162241706|gb|FC417233.1|FC417233
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162236684|gb|FC413779.1|FC413779
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162207865|gb|FC384158.1|FC384158
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162232108|gb|FC408009.1|FC408009
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|100370623|gb|BY948435.1|BY948435
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162252842|gb|FC429215.1|FC429215
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|18330213|gb|BJ162219.1|BJ162219
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|18329832|gb|BJ161838.1|BJ161838
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|67574577|gb|BJ947401.1|BJ947401
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162239410|gb|FC416796.1|FC416796
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|208400743|gb|DC904921.1|DC904921
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162226580|gb|FC403613.1|FC403613
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|18324919|gb|BJ156914.1|BJ156914
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|208371468|gb|DC931819.1|DC931819
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162153729|gb|FC329132.1|FC329132
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|100447756|gb|CJ972055.1|CJ972055
EST:     GTCACCATGCGTCGAACCGTCAACAANTCNGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|18330228|gb|BJ162234.1|BJ162234
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162235566|gb|FC411350.1|FC411350
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|67702681|gb|BJ962914.1|BJ962914
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162230662|gb|FC406085.1|FC406085
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|67574895|gb|BJ947719.1|BJ947719
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162224419|gb|FC400211.1|FC400211
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162210006|gb|FC385836.1|FC385836
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|208352449|gb|DC910177.1|DC910177
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162238934|gb|FC415111.1|FC415111
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162250279|gb|FC425933.1|FC425933
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|208398111|gb|DC908340.1|DC908340
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|208386795|gb|DC937187.1|DC937187
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162234063|gb|FC410329.1|FC410329
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162276487|gb|FC452165.1|FC452165
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|208354257|gb|DC957449.1|DC957449
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|208344633|gb|DC912579.1|DC912579
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162259845|gb|FC435980.1|FC435980
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162257187|gb|FC433063.1|FC433063
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162204312|gb|FC380500.1|FC380500
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162271522|gb|FC446471.1|FC446471
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162217892|gb|FC393888.1|FC393888
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162201840|gb|FC377774.1|FC377774
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162275956|gb|FC452024.1|FC452024
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|208386778|gb|DC937170.1|DC937170
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|18365891|gb|BJ197969.1|BJ197969
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|18366320|gb|BJ198399.1|BJ198399
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162274292|gb|FC450260.1|FC450260
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162215790|gb|FC390855.1|FC390855
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162231078|gb|FC406189.1|FC406189
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162231354|gb|FC406777.1|FC406777
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|18328014|gb|BJ160018.1|BJ160018
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162154831|gb|FC331145.1|FC331145
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162258919|gb|FC435862.1|FC435862
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|18366092|gb|BJ198170.1|BJ198170
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162201000|gb|FC378131.1|FC378131
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162276322|gb|FC452624.1|FC452624
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162212281|gb|FC388391.1|FC388391
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
EST: gi|162258220|gb|FC434619.1|FC434619
EST:     GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTG                         GTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC
genomic: GTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 73

TTCAGCCCGTCAATGAGCTCTCCCGCAAGGTCGGCAATGTCGACAGCCGCGTCACCATGCGTCGAACCGTCAACAAGTCGGCTGGCAGCGACAGCATCTGgtgcactgaa ... gttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCCGTCGTACCTGAACGGCGAGTTCGCTGGAGACTACGGGTGGGACACCGCT




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ctttccatcgctacaactgtgattctctcagtactcatcatcgattggagagtgtagagaatgcagcgcattgttgagagtagtttcgatgttgtcacagGTATGGAGCTGACCGACCCAAGTTCCTGGGCCCCTTTTCCGGCGAGACCCCGTCGTACCTGAACGGCGAGTTCGCTGGAGACTACGGGTGGGACACCGCT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAGA