1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
...caatcaagtcactacaagtaaccaagtcgtcgagggtcgcaggcatttggtcttgtggacttttgtaagcattgacaagagtgtggtgtgtgttgagtagAACGAAGGGAGCCTTTCGTTTCGACCAGCGTGGGTGCATTACAAGAATAGTTCACCTATAAAGCACGAAGCGGAGCGTCTACCACCGCCAGTTGTTGCCG
species | Physcomitrella patens |
transcript | PP1S1_121V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: ACTTGGGAATTCTGTTGCTCTCGGCGTTGTCCATTTTCTATTCGCTCCAG AACGAAGGGAGCCTTTCGTTTCGACCAGCGTGGGTGCATTACAAGAATAGTEST: gi|162256684|gb|FC433202.1|FC433202
genomic: ACTTGGGAATTCTGTTGCTCTCGGCGTTGTCCATTTTCTATTCGCTCCAGgtgagcagcg ... tgttgagtagAACGAAGGGAGCCTTTCGTTTCGACCAGCGTGGGTGCATTACAAGAATAGT
EST: ACTTGGGAATTCTGTTGCTCTCGGCGTTGTCCATTTTCTATTCGCTCCAG AACGAAGGGAGCCTTTCGTTTCGACCAGCGTGGGTGCATTACAAGAATAGT
genomic: ACTTGGGAATTCTGTTGCTCTCGGCGTTGTCCATTTTCTATTCGCTCCAGgtgagcagcg ... tgttgagtagAACGAAGGGAGCCTTTCGTTTCGACCAGCGTGGGTGCATTACAAGAATAGT
tttggtcttgtggacttttgtaagcattgacaagagtgtggtgtgtgttgagtagAACGAAGGGAGCCTTTCGTTTCGACCAGCGTGGGTGCATTACAAGAATAGTTCACCTATAAAGCACGAAGCGGAGCGTCTACCACCGCCAGTTGTTGCCG
cattgac putative branch site (score: 2)
ttttgtaa TA-rich tract