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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagaactctgtcccctccattgtttgtcctcgtcccggtgtgttatcggtgtgggcttggggtgagaagtttctgtgttatgaatgataagggttcggggtgaagatacaagtttttttttggacgtgtgtatatgttttggacgggtcgtggtttggggtggttgactattgtggcttggcgggtccgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGGCGAGGGTGATTGCTGCCATCGAGAACCCTCAGGACATCATTGTGCAGTC

Basic information

species Physcomitrella patens
transcript PP1S173_16V6.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S173_16V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: LOC_Os03g08440.2 (Oryza sativa), 3'ss of exon 1
gtgagaactctgtcccctccattgtttgtcctcgtcccggtgtgttatcggtgtgggcttggggtgagaagtttctgtgttatgaatgataagggttcggggtgaagatacaagtttttttttggacgtgtgtatatgttttggacgggtcgtggtttggggtggttgactattgtggcttggcgggtccgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGGCGAGGGTGATTGCTGCCATCGAGAACCCTCAGGACATCATTGTGCAGTC
                                                                                             |   |   ||     | |||  | ||    ||     ||    | ||||||  ||||     | | |  |   ||| ||      | | |  | | |  | |  |||||| | |||||| ||  | || ||||| |  ||||||||| |||| |||||||||||||||| |||||| |||||||| |||||||||||||| |||||
---------------------------------------------------------------------------------------------gtggcatagttgcattgcaacctgttgcaaggtatgctgctgttcttttgggagggt----atcttgaata--tgaatacgtgaacatcgttgctgcaattcatagGTATCTACATCATCAACCTCGGCAAGACATGGGAGAAGCTGCAGCTCGCGGCGAGGGTGATTGTTGCCATTGAGAACCCCCAGGACATCATTGTCCAGTC

upper sequence: PP1S173_16V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: LOC_Os07g42450.1 (Oryza sativa), 3'ss of exon 1
gtgagaactctgtcccctccattgtttgtcctcgtcccggtgtgttatcggtgtgggcttggggtgagaagtttctgtgttatgaatgataagggttcggggtgaagatacaagtttttttttggacgtgtgtatatgttttggacgggtcgtggtttggggtggttgactattgtggcttggcgggtccgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGGCGAGGGTGATTGCTGCCATCGAGAACCCTCAGGACATCATTGTGCAGTC
                                                                                       |  | ||  ||  | | | | || || || |||  |  ||   |     || | |  |  |    || | |    | ||||    || |    ||      | |||   ||||||| | ||| |||||  | || ||||| |  ||||||||  || |||| |||||||| |||| ||| || || ||||||||||||||||||||||||||
--------------------------------------------------------------------------------------agccatggaatcatgttaaggtta-aatttctttgctttacaattac---tgctctcaattgactatgttgtaaattagttggtctttcta---tg------ctgtttttcagGTATCTACATTATTAACCTTGGCAAGACCTGGGAGAAGCTCCAGTTGGCTGCGAGGGTCATTGTTGCAATTGAAAACCCTCAGGACATCATTGTGCAGTC

upper sequence: PP1S173_16V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: LOC_Os03g28410.1 (Oryza sativa), 3'ss of exon 1
gtgagaactctgtcccctccattgtttgtcctcgtcccggtgtgttatcggtgtgggcttggggtgagaagtttctgtgttatgaatgataagggttcggggtgaagatacaagtttttttttggacgtgtgtatatgttttggacgggtcgtggtttggggtggttgactattgtggcttggcgggtccgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGGCGAGGGTGATTGCTGCCATCGAGAACCCTCAGGACATCATTGTGCAGTC
                                                                                     |||  || ||             | ||  |   || |   | | |   |||  || | ||           | | | ||         | |  | | ||   |   |    |||| ||||||||||||||  | || || || |  ||||||||  ||||||| || || ||||||| |||||| |||||||| ||||||||||| ||||||||
-------------------------------------------------------------------------------------atgtgaaaggcctcc--------ttcatctgcattctcataagcg---atagattcttgattatgtaacaatggtgatgacaagaggctat--ccttgcatattt-tccttcagGCATTTTCATCATTAACCTTGGCAAAACCTGGGAGAAGCTTCAGCTGGCTGCCAGAGTGATTGTTGCCATTGAGAACCCACAGGACATCATCGTGCAGTC

upper sequence: PP1S173_16V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G126821_T01 (Zea mays), 3'ss of exon 1
gtgagaactctgtcccctccattgtttgtcctcgtcccggtgtgttatcggtgtgggcttggggtgagaagtttctgtgttatgaatgataagggttcggggtgaagatacaagtttttttttggacgtgtgtatatgttttggacgggtcgtggtttggggtggttgactattgtggcttggcgggtccgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGGCGAGGGTGATTGCTGCCATCGAGAACCCTCAGGACATCATTGTGCAGTC
                                                                                     |  || ||| ||    | | |  ||  | ||   | |  ||  | || |    |||| |  |  ||    | |         || | |||   ||    |  |   |    |||| || | |||||| ||  | || ||||| |  ||||| ||| |||| || |||||||| || | ||||||||||||||| ||||||||||| || |||||
------------------------------------------------------------------------------------cagcatgaggcttttatggggatctagtaattagctgt--gatctatggagcacttttagcagcttctccatcttcaa-----gattcttgctact----gtttttat----cagGCATCTACATCATCAACCTTGGCAAGACATGGGAGAAACTGCAGCTTGCAGCGAGGGTTATCGTTGCCATCGAGAACCCGCAGGACATCATCGTCCAGTC

upper sequence: PP1S173_16V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G099657_T01 (Zea mays), 3'ss of exon 1
gtgagaactctgtcccctccattgtttgtcctcgtcccggtgtgttatcggtgtgggcttggggtgagaagtttctgtgttatgaatgataagggttcggggtgaagatacaa-gtttttttttggacgtgtgtatatgttttggacgggtcgtggtttggggtggttgactattgtggcttggcgggtccgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGGCGAGGGTGATTGCTGCCATCGAGAACCCTCAGGACATCATTGTGCAGTC
                                                                                                          | | ||  ||      ||    |  ||||| |  ||   |       ||  |||    |  ||| |||| |      |    |   ||   |||| || | |||||| ||  |||| ||||| |  || |||||  |||| ||||||||||| |||| |||||| |||||||| || |||||||| || |||||
---------------------------------------------------------------------------------------------------taactgcggtgcagtgtagcagcttaatagcatgtatgttcttcacagtcaatatgaattgttaggtgtga-tattctattcctgttactttttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGGCGAGGGTTATTGTTGCCATTGAGAACCCACAAGACATCATCGTCCAGTC

upper sequence: PP1S173_16V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G092719_T01 (Zea mays), 3'ss of exon 1
gtgagaactctgtcccctccattgtttgtcctcgtcccggtgtgttatcggtgtgggcttggggtgagaagtttctgtgttatgaatgataagggttcggggtgaagatacaagtttttttttggacgtgtgtatatgttttggacgggtcgtggtttggggtggttgactattgtggcttggcgggtccgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGGCGAGGGTGATTGCTGCCATCGAGAACCCTCAGGACATCATTGTGCAGTC
                                                                                             | |  |   ||  ||     ||      ||    | |  |  || ||   || |  | || |  || | |        ||  |   ||      |   |||  |||| || | |||||| ||| | || ||||| |  || || ||  |||| || |||||||| || | ||||||||||||||| ||||||||||| || |||||
-------------------------------------------------------------------------------------------tagctgtgaattgtggagcaccgtagcagcttaatagcgctt-catcttcaagatgaattgttgggtgtgatatacattcatgctacttt------ttttttgt-cagGCATCTACATCATCAATCTTGGCAAGACATGGGATAAACTCCAGCTTGCAGCGAGGGTTATCGTTGCCATCGAGAACCCGCAGGACATCATCGTCCAGTC

upper sequence: PP1S173_16V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: GRMZM2G099657_T04 (Zea mays), 3'ss of exon 1
gtgagaactctgtcccctccattgtttgtcctcgtcccggtgtgttatcggtgtgggcttggggtgagaagtttctgtgttatgaatgat----aagggttcggggtgaagatacaagtttttttttggacgtgtgtatatgttttggacgggtcgtggtttggggtggttgactattgtggcttggcgggtccgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGGCGAGGGTGATTGCTGCCATCGAGAACCCTCAGGACATCATTGTGCAGTC
             |  || |||  |    ||| | |  |   ||  ||  |     ||| | || |||   | |   ||  ||  |  |     |||   ||   ||  ||   |          |  | |  | ||   |||  |  |     ||  ||     |  |   | |    | ||| || ||   |    | | ||||  |||| || | |                                                                                    
-------------catctacatcatcaa-cctgggcaagacatgggataagctccagctcgcggcgagggttattgttgccattgagaacccacaagacatcatcgtccagt--cgGCCCGCCCCTACGGCCAGCGTGC-TGTCCTCAAGTTCGCGCAGTACACTGGCGCCCA-TGCCATCGCTGGGAGG---CACACCCCTGGTACCTTCACCAATCAGC----------------------------------------------------------------------------------

upper sequence: PP1S173_16V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: Vv09s0002g00610.t01 (Vitis vinifera), 3'ss of exon 1
gtgagaactctgtcccctccattgtttgtcctcgtcccggtgtgttatcggtgtgggcttggggtgagaagtttctgtgttatgaatgataagggttcggggtgaa-gatacaagtttttttttggacgtgtgtatatgttttggacgggtcgtggtttggggtggttgactattgtggcttggcgggtccgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGGCGAGGGTGATTGCTGCCATCGAGAACCCTCAGGACATCATTGTGCAGTC
                                                                                           |   |  | ||  ||  | |  | ||  |   ||  ||  | | || | | || |  | |  ||        |  |    | || || |||      ||   ||  |||| |||| |||||| ||  | ||||| || |  ||||||||| |||| || || |||||||||| ||| || ||||||||| ||||||||||||| |||||
-------------------------------------------------------------------------------------------accatctgcggaaaataacatgatttgatggatgatcggttttgta-gatatgaaatgattttg--ccaaaattttaagatcttttgtctt------tctaatgatcagGGATTTACATCATCAACCTTGGAAAAACATGGGAGAAGCTGCAGCTTGCAGCCAGGGTGATTGTTGCGATTGAGAACCCTAAGGACATCATTGTTCAGTC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|67727276|gb|BJ977535.1|BJ977535
EST:     TGGAAGCGGCGNTCCGATG                         GTA-TTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTNGAGCTGGCGG
genomic: TGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|67578181|gb|BJ950348.1|BJ950348
EST:     GAACTGCGACTTCCAGATGGAGCGCTNCGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|100385907|gb|BY951101.1|BY951101
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|208372963|gb|DC940594.1|DC940594
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|67703055|gb|BJ963288.1|BJ963288
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|208344378|gb|DC912737.1|DC912737
EST:     GAACTGCGACTTCCAGATGGTGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162210623|gb|FC386311.1|FC386311
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|18350388|gb|BJ182439.1|BJ182439
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|18345087|gb|BJ177128.1|BJ177128
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162154106|gb|FC330549.1|FC330549
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|67718769|gb|BJ969028.1|BJ969028
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|18367472|gb|BJ199555.1|BJ199555
EST:     GAACTGCGACTTCCATATGGAGCGCTACGTGTGGAANCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGANCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|18347830|gb|BJ179877.1|BJ179877
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|208351525|gb|DC905702.1|DC905702
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|67716322|gb|BJ966582.1|BJ966582
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|67702908|gb|BJ963141.1|BJ963141
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|100392127|gb|BY953207.1|BY953207
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|18346353|gb|BJ178396.1|BJ178396
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|18359199|gb|BJ191259.1|BJ191259
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|67702840|gb|BJ963073.1|BJ963073
EST:     GAACTGCNACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGANAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|208345480|gb|DC913027.1|DC913027
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|67703663|gb|BJ963896.1|BJ963896
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|67717743|gb|BJ968002.1|BJ968002
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|67709570|gb|BJ965386.1|BJ965386
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|100408041|gb|BY955880.1|BY955880
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|100381857|gb|BY968949.1|BY968949
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|22132935|gb|BQ827446.1|BQ827446
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|208388172|gb|DC941755.1|DC941755
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162241013|gb|FC416644.1|FC416644
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|208380049|gb|DC914599.1|DC914599
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|208344868|gb|DC912702.1|DC912702
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGGAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|18355134|gb|BJ187193.1|BJ187193
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|22133293|gb|BQ827655.1|BQ827655
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|67703740|gb|BJ963973.1|BJ963973
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162156689|gb|FC333545.1|FC333545
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162240857|gb|FC415136.1|FC415136
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|208360894|gb|DC934790.1|DC934790
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|208381689|gb|DC928352.1|DC928352
EST:     TGCGACTTCCAGATGGAGCGCTACGTGTGGAAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: TGCGACTTCCAGATGGAGCGCTACGTGTGG-AAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|67704705|gb|BJ964938.1|BJ964938
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|100387131|gb|BY951530.1|BY951530
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162204914|gb|FC380596.1|FC380596
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|18374782|gb|BJ206360.1|BJ206360
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGTCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|18351240|gb|BJ183292.1|BJ183292
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162267031|gb|FC441832.1|FC441832
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|67570498|gb|BJ943322.1|BJ943322
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|208346891|gb|DC905435.1|DC905435
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162205076|gb|FC381785.1|FC381785
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|100391250|gb|BY971562.1|BY971562
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|208387978|gb|DC941659.1|DC941659
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAATGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162271980|gb|FC448398.1|FC448398
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162274981|gb|FC450632.1|FC450632
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162253932|gb|FC430605.1|FC430605
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|18358694|gb|BJ190753.1|BJ190753
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162227892|gb|FC403700.1|FC403700
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|67702851|gb|BJ963084.1|BJ963084
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|100360102|gb|BY966026.1|BY966026
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|100395711|gb|BY972128.1|BY972128
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162179288|gb|FC356237.1|FC356237
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162280409|gb|FC456114.1|FC456114
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162210561|gb|FC386857.1|FC386857
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|67573005|gb|BJ945829.1|BJ945829
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162269074|gb|FC444942.1|FC444942
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162254722|gb|FC431011.1|FC431011
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162242723|gb|FC416388.1|FC416388
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|18325659|gb|BJ157656.1|BJ157656
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|67716265|gb|BJ966525.1|BJ966525
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|100426810|gb|BY977374.1|BY977374
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|67712793|gb|BJ966242.1|BJ966242
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|100356450|gb|BY946371.1|BY946371
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162229590|gb|FC405898.1|FC405898
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162252711|gb|FC428748.1|FC428748
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|67704734|gb|BJ964967.1|BJ964967
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|100429728|gb|BY959708.1|BY959708
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|18351815|gb|BJ183867.1|BJ183867
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
EST: gi|162264708|gb|FC441706.1|FC441706
EST:     GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATG                         GTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG
genomic: GAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 33 (upstream exon), 35 (downstream exon)
Score: 33

GAGAGCGATGTGCAGATGATGCTGGCTGCTGATGTGCACCTCGGCACCAAGAACTGCGACTTCCAGATGGAGCGCTACGTGTGGAAGCGGCGCTCCGATGgtgagaactc ... cgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGGCGAGGGTGATTGCTGCCATCGAGAACCCTCAGGACATCATTGTGCAGTC




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

acgggtcgtggtttggggtggttgactattgtggcttggcgggtccgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGGCGAGGGTGATTGCTGCCATCGAGAACCCTCAGGACATCATTGTGCAGTC
                   ggttgac  putative branch site (score: 33)
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtgagaactctgtcccctccattgtttgtcctcgtcccggtgtgttatcggtgtgggcttggggtgagaagtttctgtgttatgaatgataagggttcggggtgaagatacaagtttttttttggacgtgtgtatatgttttggacgggtcgtggtttggggtggttgactattgtggcttggcgggtccgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGGCGAGGGTGATTGCTGCCATCGAGAACCCTCAGGACATCATTGTGCAGTC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC