Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacgtactctgtacttttcttgtaatatatatatatatatatatatatatatatacatacttatatatatttgaagtatttttttttctctatgtgtgattctctcgtaggttgcttatttgttcgggagacatggaaattgaatgttctatctgctggttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAGAAGATGAAGTACTTGAGGTTTTTGAGGAAGAGGATGAACACTAAGCCTA

Basic information

species Physcomitrella patens
transcript PP1S165_40V6.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S165_40V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: EFJ34798 (Selaginella moellendorffii), 3'ss of exon 1
gtacgtactctgtacttttcttgtaatatatatatatatatatatatatatatatacatacttatatatatttgaagtatttttttttctctatgtgtgattctctcgtaggttgcttatttgttcgggagacatggaaattgaatgttctatctgctggttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAGAAGATGAAGTACTTGAGGTTTTTGAGGAAGAGGATGAACACTAAGCCTA
                                                                                                           ||||     |     | ||     |   |  | ||||    ||| ||  |||  |     |||||| |    || |  ||||| ||    || || || ||||||||  | ||||||||||||||| |||||||| |||||||| | |||||||| ||||| |
-----------------------------------------------------------------------------------------------------------gtagaaaaatctcgcgatcttagaatgcgcta-ttgat--ctctttccactgtgtt---ccagGTTATCACGCGATGCGAGGAGATTGCTCTCTCGGGCGGCCTCGTCCGCCAGAAGATGAAGTACCTGAGGTTTCTGAGGAAGCGCATGAACACGAAGCCCA

upper sequence: PP1S165_40V6.1 (Physcomitrella patens), 3'ss of exon 1
lower sequence: EFJ23532 (Selaginella moellendorffii), 3'ss of exon 1
gtacgtactctgtacttttcttgtaatatatatatatatatatatatatatatatacatacttatatatatttgaagtatttttttttctctatgtgtgattctctcgtaggttgcttatttgttcgggagacatggaaattgaatgttctatctgctggttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAGAAGATGAAGTACTTGAGGTTTTTGAGGAAGAGGATGAACACTAAGCCTA
                                                                                                           ||||     |     | ||     |   |  | ||||    ||| ||  |||  |     |||||| |    || |  ||||| ||    || || || ||||||||  | ||||||||||||||| |||||||| |||||||| | |||||||| ||||| |
-----------------------------------------------------------------------------------------------------------gtagaaaaatctcgcgatcttagaatgcgcta-ttgat--ctctttccactgtgtt---ccagGTTATCACGCGATGCGAGGAGATTGCTCTCTCGGGCGGCCTCGTCCGCCAGAAGATGAAGTACCTGAGGTTTCTGAGGAAGCGCATGAACACCAAGCCCA
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|19790799|gb|BQ042060.1|BQ042060
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18349688|gb|BJ181738.1|BJ181738
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67723699|gb|BJ973958.1|BJ973958
EST:     GCCGCTTGGCCTCCATCCTCTCCGAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67727402|gb|BJ977661.1|BJ977661
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18351744|gb|BJ183796.1|BJ183796
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|208390391|gb|DC933436.1|DC933436
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162179780|gb|FC356371.1|FC356371
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|19777477|gb|BQ039187.1|BQ039187
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|37847889|gb|BJ605897.1|BJ605897
EST:     AATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCNTCGTGAGGCAG
genomic: AATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18338756|gb|BJ170780.1|BJ170780
EST:     GCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|208389209|gb|DC933237.1|DC933237
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162248471|gb|FC419787.1|FC419787
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|37850125|gb|BJ608133.1|BJ608133
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162226438|gb|FC402418.1|FC402418
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18361931|gb|BJ193998.1|BJ193998
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18367405|gb|BJ199488.1|BJ199488
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|100412104|gb|BY956416.1|BY956416
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67724485|gb|BJ974744.1|BJ974744
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18337171|gb|BJ169195.1|BJ169195
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18351942|gb|BJ183994.1|BJ183994
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162249768|gb|FC427571.1|FC427571
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67719085|gb|BJ969344.1|BJ969344
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162243069|gb|FC417917.1|FC417917
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67717215|gb|BJ967474.1|BJ967474
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162248472|gb|FC419788.1|FC419788
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|37846595|gb|BJ604603.1|BJ604603
EST:     CTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTNTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: CTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67572309|gb|BJ945133.1|BJ945133
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|19788908|gb|BQ040993.1|BQ040993
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18351423|gb|BJ183475.1|BJ183475
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18373907|gb|BJ205485.1|BJ205485
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|100383589|gb|BY950373.1|BY950373
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|208350725|gb|DC918185.1|DC918185
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67719783|gb|BJ970042.1|BJ970042
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162226439|gb|FC402419.1|FC402419
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|100445000|gb|BY982828.1|BY982828
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162220761|gb|FC395530.1|FC395530
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67712774|gb|BJ966223.1|BJ966223
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67709727|gb|BJ965543.1|BJ965543
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAGATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67723870|gb|BJ974129.1|BJ974129
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162243068|gb|FC417916.1|FC417916
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162254030|gb|FC429346.1|FC429346
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67709794|gb|BJ965610.1|BJ965610
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18339393|gb|BJ171420.1|BJ171420
EST:     TTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: TTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18367441|gb|BJ199524.1|BJ199524
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|100416078|gb|BY957065.1|BY957065
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|37825214|gb|BJ583280.1|BJ583280
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|208386852|gb|DC953505.1|DC953505
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18328961|gb|BJ160967.1|BJ160967
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18363207|gb|BJ195279.1|BJ195279
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|208375440|gb|DC940494.1|DC940494
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18368837|gb|BJ200922.1|BJ200922
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|37824408|gb|BJ582474.1|BJ582474
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|22491916|gb|BU051839.1|BU051839
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67702391|gb|BJ962624.1|BJ962624
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGGCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162254031|gb|FC429347.1|FC429347
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67723804|gb|BJ974063.1|BJ974063
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAGATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67726948|gb|BJ977207.1|BJ977207
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|208392486|gb|DC904290.1|DC904290
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67725732|gb|BJ975991.1|BJ975991
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162180944|gb|FC358598.1|FC358598
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67695678|gb|BJ955911.1|BJ955911
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|100388424|gb|BY952026.1|BY952026
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18356624|gb|BJ188683.1|BJ188683
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|37833564|gb|BJ591576.1|BJ591576
EST:     TCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: TCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162249767|gb|FC427570.1|FC427570
EST:     CAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: CAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|37846844|gb|BJ604852.1|BJ604852
EST:     CCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: CCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|208352325|gb|DC901984.1|DC901984
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18345336|gb|BJ177379.1|BJ177379
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18369010|gb|BJ201095.1|BJ201095
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67718502|gb|BJ968761.1|BJ968761
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|19790850|gb|BQ042088.1|BQ042088
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67709623|gb|BJ965439.1|BJ965439
EST:     GCCGCTTGGCCTCCATCCTCTCCGAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162196728|gb|FC374667.1|FC374667
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|37840421|gb|BJ598429.1|BJ598429
EST:     CCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: CCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18326014|gb|BJ158013.1|BJ158013
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67728047|gb|BJ978306.1|BJ978306
EST:     TCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: TCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18346103|gb|BJ178146.1|BJ178146
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|37824975|gb|BJ583041.1|BJ583041
EST:     CTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: CTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18375445|gb|BJ207023.1|BJ207023
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67723681|gb|BJ973940.1|BJ973940
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGGGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67726026|gb|BJ976285.1|BJ976285
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162196727|gb|FC374666.1|FC374666
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18366465|gb|BJ198544.1|BJ198544
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162268483|gb|FC444356.1|FC444356
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18326477|gb|BJ158476.1|BJ158476
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|100446358|gb|CJ970657.1|CJ970657
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162237121|gb|FC413280.1|FC413280
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162278187|gb|FC454422.1|FC454422
EST:     CTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: CTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162278188|gb|FC454423.1|FC454423
EST:     CTCAATGGCCCGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGCGGCCTCGTGAGGCAG
genomic: CTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|37850299|gb|BJ608307.1|BJ608307
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18345862|gb|BJ177905.1|BJ177905
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|208373395|gb|DC941034.1|DC941034
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|208351635|gb|DC910037.1|DC910037
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|18342225|gb|BJ174260.1|BJ174260
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162179781|gb|FC356372.1|FC356372
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67709605|gb|BJ965421.1|BJ965421
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGGGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162250761|gb|FC426610.1|FC426610
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|208382836|gb|DC923883.1|DC923883
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|67703849|gb|BJ964082.1|BJ964082
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
EST: gi|162263818|gb|FC438632.1|FC438632
EST:     GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTC                         GTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG
genomic: GCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 145

AGGTCTCTGCGCCAAGGTGGTCGTGGTCGATGCTCGCCACCACATGCTCGGCCGCTTGGCCTCCATCCTCTCCAAAGAGCTTCTCAATGGCCAGAAAGTCgtacgtactc ... ttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAGAAGATGAAGTACTTGAGGTTTTTGAGGAAGAGGATGAACACTAAGCCTA




<











<


<











 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cttatttgttcgggagacatggaaattgaatgttctatctgctggttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAGAAGATGAAGTACTTGAGGTTTTTGAGGAAGAGGATGAACACTAAGCCTA
                      aaattgaat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtacgtactctgtacttttcttgtaatatatatatatatatatatatatatatatacatacttatatatatttgaagtatttttttttctctatgtgtgattctctcgtaggttgcttatttgttcgggagacatggaaattgaatgttctatctgctggttggggtcagGTTGTTGTTCGTTCTGAGGAAATCTGCCTGTCCGGTGGCCTCGTGAGGCAGAAGATGAAGTACTTGAGGTTTTTGAGGAAGAGGATGAACACTAAGCCTA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGGATG