1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...tgcgtagttgatccaatcatggcgttttctgatatacaggagttccttgcatttgtcaactgaatgtaggatgaacctaaacttcctctctttcatgcagTGAGAAACATTACACGCACACTTAGCTGTGAGACGAGTAATACCGAAGGTGGTTTGAACTTCCGTTCAGGACACATTGATCTTGTTATAGCATCCGGATT
species | Physcomitrella patens |
transcript | PP1S15_387V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TTGAAGTTGTCGAGGTTGCTCAGAGAGGATTGGATAAG TGAGAAACATTACACGCACACTTAGCTGTGAGACGAGTAATACCGAAGGTG
genomic: TTGAAGTTGTCGAGGTTGCTCAGAGAGGATTGGATAAGgtgagtcgga ... tttcatgcagTGAGAAACATTACACGCACACTTAGCTGTGAGACGAGTAATACCGAAGGTG
cttgcatttgtcaactgaatgtaggatgaacctaaacttcctctctttcatgcagTGAGAAACATTACACGCACACTTAGCTGTGAGACGAGTAATACCGAAGGTGGTTTGAACTTCCGTTCAGGACACATTGATCTTGTTATAGCATCCGGATT
acctaaa putative branch site (score: 5)
cttcctctctttcatg CT-rich tract
taaactt TA-rich tract