1 5' 3' | 2 5' 3' | 3 5' 3' |
...agactccgctcagtatgccatgtaattttcatgtaccatgttgtcggagtacaagttctttttaataaaagttttcaatggattgacattgtctggtcagGTTGATGACAAGGACCAAACTGGATCGATGAATAAGAAGTCGATGCAAAAGTTTTTGGGACCTCAAGGTTGTAGCAGACTTGAAAGTATCAGTGCTTTAG
species | Physcomitrella patens |
transcript | PP1S147_136V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTTGCCCAGCTGTGCAGAATGCTAATTCCGTAAACAAGCGCCCTCTTACG GTTGATGACAAGGACCAAACTGGATCGATGAATAAGAAGTCGATGCAAAAGEST: gi|162256141|gb|FC432426.1|FC432426
genomic: CTTGCCCAGCTGTGCAGAATGCTAATTCCGTAAACAAGCGCCCTCTTACGgtaaggctat ... gtctggtcagGTTGATGACAAGGACCAAACTGGATCGATGAATAAGAAGTCGATGCAAAAG
EST: CTTGCCCAGCTGTGCAGAATGCTAATTCCGTAAACAAGCGCCCTCTTACG GTTGATGACAAGGACCAAACTGGATCGATGAATAAGAAGTCGATGCAAAAGEST: gi|162179116|gb|FC355581.1|FC355581
genomic: CTTGCCCAGCTGTGCAGAATGCTAATTCCGTAAACAAGCGCCCTCTTACGgtaaggctat ... gtctggtcagGTTGATGACAAGGACCAAACTGGATCGATGAATAAGAAGTCGATGCAAAAG
EST: CTTGCCCAGCTGTGCAGAATGCTAATTCCGTAAACAAGCGCCCTCTTACG GTTGATGACAAGGACCAAACTGGATCGATGAATAAGAAGTCGATGCAAAAG
genomic: CTTGCCCAGCTGTGCAGAATGCTAATTCCGTAAACAAGCGCCCTCTTACGgtaaggctat ... gtctggtcagGTTGATGACAAGGACCAAACTGGATCGATGAATAAGAAGTCGATGCAAAAG
ggagtacaagttctttttaataaaagttttcaatggattgacattgtctggtcagGTTGATGACAAGGACCAAACTGGATCGATGAATAAGAAGTCGATGCAAAAGTTTTTGGGACCTCAAGGTTGTAGCAGACTTGAAAGTATCAGTGCTTTAG
gattgac putative branch site (score: 11)
aagttctttttaataa TA-rich tract