1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
...gcaagcgatcgacgtggggtcatacgcacttaccgtatcgtcctttttttattttaataatttactttactgtttgaagaactttttttcggatctgtagGCATTTAAAGGCAGCATTGAGAGGCGATGGCGAGCAACTTCATGAGTGTGCAGGAGCGTAGGATCGCGACTCTTTCAGGTCATTTCCGTGGCGCAGCAGC
species | Physcomitrella patens |
transcript | PP1S132_95V6.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CGTCCCGTATCGCGTGTGGATCCTTGGAGTGCACCACAATCTTCTTACCT GCATTTAAAGGCAGCATTGAGAGGCGATGGCGAGCAACTTCATGAGTGTGCEST: gi|162182167|gb|FC358182.1|FC358182
genomic: CGTCCCGTATCGCGTGTGGATCCTTGGAGTGCACCACAATCTTCTTACCTgtaagtgcgt ... ggatctgtagGCATTTAAAGGCAGCATTGAGAGGCGATGGCGAGCAACTTCATGAGTGTGC
EST: CGTCCCGTATCGCGTGTGGATCCTTGGAGTGCACCACAATCTTCTTACCT GCATTTAAAGGCAGCATTGAGAGGCGATGGCGAGCAACTTCATGAGTGTGC
genomic: CGTCCCGTATCGCGTGTGGATCCTTGGAGTGCACCACAATCTTCTTACCTgtaagtgcgt ... ggatctgtagGCATTTAAAGGCAGCATTGAGAGGCGATGGCGAGCAACTTCATGAGTGTGC
tttttattttaataatttactttactgtttgaagaactttttttcggatctgtagGCATTTAAAGGCAGCATTGAGAGGCGATGGCGAGCAACTTCATGAGTGTGCAGGAGCGTAGGATCGCGACTCTTTCAGGTCATTTCCGTGGCGCAGCAGC
ttttaat putative branch site (score: 2)
ctttttttcg putative PPT
attttaataatttact TA-rich tract