1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...gctgagtcccttgatcctccagtctacttttttccacctcagtttgagtttctagttttgccgagtatttacaatatcgtatttgacatcttcttaacagAAATATGGCCACCTCCAAAAGTAAATTACCTGCAGCGCCAGAAGTTTCTCCACTTTCTCTACCGACGGTGCAAACCCCATATTATCCTGACCAATTGAAT
species | Physcomitrella patens |
transcript | PP1S129_113V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: ATGACGCTTACTACTGGTTTCAG AAATATGGCCACCTCCAAAAGTAAATTACCTGCAGCGCCAGAAGTTTCTCC
genomic: ATGACGCTTACTACTGGTTTCAGgttagtttcg ... ttcttaacagAAATATGGCCACCTCCAAAAGTAAATTACCTGCAGCGCCAGAAGTTTCTCC
gagtttctagttttgccgagtatttacaatatcgtatttgacatcttcttaacagAAATATGGCCACCTCCAAAAGTAAATTACCTGCAGCGCCAGAAGTTTCTCCACTTTCTCTACCGACGGTGCAAACCCCATATTATCCTGACCAATTGAAT
atttgac putative branch site (score: 4)
catcttctt CT-rich tract
agtatttacaatat TA-rich tract