1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...tgactgatttatggaattagctctgcgaattctctactccatcttgtttgtgctgcacttgtgggagatggtaacgccgctccgggttgtaaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGACAGCCAAATCCTTCAAAGGCATCTACAGTTCTCTCGATTCAGCTATAG
species | Physcomitrella patens |
transcript | PP1S106_16V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|162272414|gb|FC449053.1|FC449053
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|18330797|gb|BJ162803.1|BJ162803
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100433033|gb|BY978779.1|BY978779
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100442391|gb|BY981415.1|BY981415
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|18327178|gb|BJ159180.1|BJ159180
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100443652|gb|BY963749.1|BY963749
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100376437|gb|BY986166.1|BY986166
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100389978|gb|BY989058.1|BY989058
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTCTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|208391546|gb|DC933795.1|DC933795
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAC GNTCCAGGGCCTTAEST: gi|100423908|gb|BY976585.1|BY976585
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTA
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100388263|gb|BY951865.1|BY951865
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|18374969|gb|BJ206547.1|BJ206547
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGGGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100398640|gb|BY990442.1|BY990442
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100385283|gb|BY950875.1|BY950875
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100358870|gb|BY946730.1|BY946730
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|208361729|gb|DC934969.1|DC934969
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100442905|gb|BY963400.1|BY963400
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100440203|gb|BY962116.1|BY962116
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100414968|gb|BY975102.1|BY975102
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100402552|gb|BY954892.1|BY954892
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|162264750|gb|FC440317.1|FC440317
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|208361815|gb|DC939037.1|DC939037
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|18373891|gb|BJ205469.1|BJ205469
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100424612|gb|BY976727.1|BY976727
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100361536|gb|BY984055.1|BY984055
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100429739|gb|BY959714.1|BY959714
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100353592|gb|BY964884.1|BY964884
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100398916|gb|BY990580.1|BY990580
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|208363654|gb|DC935349.1|DC935349
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100386649|gb|BY970190.1|BY970190
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|18346203|gb|BJ178246.1|BJ178246
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100396166|gb|BY972267.1|BY972267
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|67574343|gb|BJ947167.1|BJ947167
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100433798|gb|BY960712.1|BY960712
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|162266592|gb|FC441978.1|FC441978
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100422587|gb|BY976448.1|BY976448
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|162274536|gb|FC450979.1|FC450979
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100441950|gb|BY981173.1|BY981173
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100351703|gb|BY964507.1|BY964507
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100359398|gb|BY984234.1|BY984234
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|67574307|gb|BJ947131.1|BJ947131
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100378561|gb|BY968661.1|BY968661
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100388495|gb|BY952097.1|BY952097
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100422802|gb|BY958008.1|BY958008
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100436049|gb|BY979354.1|BY979354
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100446294|gb|CJ970593.1|CJ970593
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100445835|gb|CJ970134.1|CJ970134
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100361912|gb|BY947689.1|BY947689
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100452339|gb|CJ975221.1|CJ975221
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100445486|gb|CJ975635.1|CJ975635
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|208384825|gb|DC907438.1|DC907438
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100397747|gb|BY990380.1|BY990380
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100364728|gb|BY947878.1|BY947878
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100385568|gb|BY969905.1|BY969905
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|67573259|gb|BJ946083.1|BJ946083
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100426321|gb|BY958839.1|BY958839
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100401401|gb|BY990984.1|BY990984
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|18359390|gb|BJ191451.1|BJ191451
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100362785|gb|BY947527.1|BY947527
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100452865|gb|CJ975482.1|CJ975482
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100366110|gb|BY967284.1|BY967284
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100441331|gb|BY962620.1|BY962620
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|18374784|gb|BJ206362.1|BJ206362
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100452623|gb|CJ975362.1|CJ975362
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|18332361|gb|BJ164374.1|BJ164374
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGEST: gi|100396260|gb|BY972314.1|BY972314
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
EST: TGGCGGAGAATTCATGGCGTCAAGGAGAGTTGGAGGGGTGTTGCTCGCAG GTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
genomic: TGGCGGAGAATTCATGGCGTCAAGGAGAATTGGAGGGGTGTTGCTCGCAGgtgggtactc ... aaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGG
gtttgtgctgcacttgtgggagatggtaacgccgctccgggttgtaaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGACAGCCAAATCCTTCAAAGGCATCTACAGTTCTCTCGATTCAGCTATAG
tggtaac putative branch site (score: 37)
ttgtaaattaa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tgactgatttatggaattagctctgcgaattctctactccatcttgtttgtgctgcacttgtgggagatggtaacgccgctccgggttgtaaattaacagGTTCGAGGGCCTTATCTAGGCAGCATGGACTTACTGGTGCCTCTGCAGCGGACAGCCAAATCCTTCAAAGGCATCTACAGTTCTCTCGATTCAGCTATAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - tgctgca