Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|100397631|gb|BY990323.1|BY990323EST: TCTGTTT-AATGTGTGTGGTTCGTTGATTCTGATTGTTCTTCGTTTCATG GTGTGAGAGTTCAGACGCGGTAACTGTGAAATCAGTAGTGAAATGGCGATG
genomic: TCTGTTTCAATGTGTGTGGTTCGTTGATTCTGATTGTTCTTCGTTTCATGgtgattgtta ... tgttgagcagGTGTGAGAGTTCAGACGCGGTAACTGTGAAATCAGTAGTGAAATGGCGATG
EST:
gi|100385321|gb|BY950913.1|BY950913EST: TCTGTTTCAATGTGTGTGGTTCGTTGATTCTGATTGTTCTTCGTTTCATG GTGTGAGAGTTCAGACGCGGTAACTGTGAAATCAGTAGTGAAATGGCGATG
genomic: TCTGTTTCAATGTGTGTGGTTCGTTGATTCTGATTGTTCTTCGTTTCATGgtgattgtta ... tgttgagcagGTGTGAGAGTTCAGACGCGGTAACTGTGAAATCAGTAGTGAAATGGCGATG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
tgattgtgattgggtcctgcggggttgtttgtgatgtgtggtcttggaaatgatctgaagaggatcgaggttgccgtgtgtgtgtgtgcatgttgagcagGTGTGAGAGTTCAGACGCGGTAACTGTGAAATCAGTAGTGAAATGGCGATGGCGACCGCGGCCGCAGGCCCCAAGCTCACTGCTCTGAGGAGGAGCAATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA