1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtgtgcctatgaacatctctatggttgctagtgttccttattgctcggattgaaacctcttaatttttctttgcatcctgtcagAGGTTCGAAGTTCCCAGAATGGTGTATCACGTTCACCATCCCAGGCAAAGTTGAATCAAACTATGGCAATCATGCCAATGACATCAAGTGGTCCAGTACC
species | Oryza sativa |
transcript | LOC_Os12g13170.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: GATTCACATCACAAGGAAAGTGGACAAGAGCAAGATGGAG AGGGTTCGAAGTTCCCAGAATGGTGTATCACGTTCACCATCCCAGGCAAAGEST: gi|86879567|gb|CI327191.1|CI327191
genomic: GATTCACATCACAAGGAAAGTGGACAAGAGCAAGATGGAGgtgtgcctat ... atcctgtcagAGG-TTCGAAGTTCCCAGAATGGTGTATCACGTTCACCATCCCAGGCAAAG
EST: GATTCACATCACAAGGAAAGTGGACAAGAGCAAGATGGAG AGGTTCGAAGTTCCCAGAATGGTGTATCACGTTCACCATCCCAGGCAAAGT
genomic: GATTCACATCACAAGGAAAGTGGACAAGAGCAAGATGGAGgtgtgcctat ... atcctgtcagAGGTTCGAAGTTCCCAGAATGGTGTATCACGTTCACCATCCCAGGCAAAGT
agtgttccttattgctcggattgaaacctcttaatttttctttgcatcctgtcagAGGTTCGAAGTTCCCAGAATGGTGTATCACGTTCACCATCCCAGGCAAAGTTGAATCAAACTATGGCAATCATGCCAATGACATCAAGTGGTCCAGTACC
tcttaat putative branch site (score: 3)
tttttctttgcatcct CT-rich tract
tcttaatttttcttt TA-rich tract