1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtgtgcttcagtgctttcttgtttccttgttggattagcttgttgtagataatgcgtttgtaaactttgtcatttattaaattgacttatgcttcctctctagATGAACACTTTTGCCGATGTCATAAAATCTGTCGACAAGAAGTTTCACTGTAATACTGAGAGTAATGCTCACAATCATCCGCCATGTTACTTCACAACTG
species | Oryza sativa |
transcript | LOC_Os11g38610.2 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: AGAGCACATATTTTCTCAACGTTGGTGCAAGTGAACTGCGGAATATTGAG ATGAACACTTTTGCCGATGTCATAAAATCTGTCGACAAGAAGTTTCACTGTEST: gi|86480401|gb|CI123034.1|CI123034
genomic: AGAGCACATATTTTCTCAACGTTGGTGCAAGTGAACTGCGGAATATTGAGgtgtgcttca ... tcctctctagATGAACACTTTTGCCGATGTCATAAAATCTGTCGACAAGAAGTTTCACTGT
EST: TATTTTCTCAACGTTGGTGCAAGTGAACTGCGGAATATTGAG ATGAACACTTTTGCCGATGTCATAAAATCTGTCGACAAGAAGTTTCACTGT
genomic: TATTTTCTCAACGTTGGTGCAAGTGAACTGCGGAATATTGAGgtgtgcttca ... tcctctctagATGAACACTTTTGCCGATGTCATAAAATCTGTCGACAAGAAGTTTCACTGT
ataatgcgtttgtaaactttgtcatttattaaattgacttatgcttcctctctagATGAACACTTTTGCCGATGTCATAAAATCTGTCGACAAGAAGTTTCACTGTAATACTGAGAGTAATGCTCACAATCATCCGCCATGTTACTTCACAACTG
aattgac putative branch site (score: 4)
cttatgcttcctctct CT-rich tract
tttgtaaactttgtca TA-rich tract