1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtaggagtaattcggttactatattttttctgcttatgatggttaccttctaagcaatgtgttttgattttcagGCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATGTGAACAGAATAGAAAGGGAGTCTGGGGTCAAATTTGAACATATCTCTGC
species | Oryza sativa |
transcript | LOC_Os09g34910.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAG GCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATGEST: gi|29672112|gb|CB668387.1|CB668387
genomic: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAGgtaggagtaa ... tgattttcagGCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATG
EST: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAG GCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATGEST: gi|218486017|gb|FG967018.1|FG967018
genomic: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAGgtaggagtaa ... tgattttcagGCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATG
EST: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAG GCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATGEST: gi|88336930|gb|CI627010.1|CI627010
genomic: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAGgtaggagtaa ... tgattttcagGCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATG
EST: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAG GCAATACTGGTGTTGCTGTEST: gi|87023726|gb|CI286477.1|CI286477
genomic: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAGgtaggagtaa ... tgattttcagGCAATACTGGTGTTGCTGT
EST: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAG GCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATGEST: gi|58686669|gb|CK075356.1|CK075356
genomic: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAGgtaggagtaa ... tgattttcagGCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATG
EST: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAG GCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATGEST: gi|218502440|gb|FG963347.1|FG963347
genomic: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAGgtaggagtaa ... tgattttcagGCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATG
EST: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAG GCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATGEST: gi|218487667|gb|FG948994.1|FG948994
genomic: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAGgtaggagtaa ... tgattttcagGCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATG
EST: ACGTGATGTTGAA-CCTACATACACCGGTCAGGTCGGACTGGGAGAGCAG GCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATGEST: gi|218495874|gb|FG947056.1|FG947056
genomic: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAGgtaggagtaa ... tgattttcagGCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATG
EST: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAG GCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATGEST: gi|29637932|gb|CB642941.1|CB642941
genomic: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAGgtaggagtaa ... tgattttcagGCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATG
EST: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAG GCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATGEST: gi|58691703|gb|CK080390.1|CK080390
genomic: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAGgtaggagtaa ... tgattttcagGCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATG
EST: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAG GCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATG
genomic: ACGTGATGTTGAAGCCTACATACACCGGTCAGGTCGGACTGGGAGAGCAGgtaggagtaa ... tgattttcagGCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATG
tatattttttctgcttatgatggttaccttctaagcaatgtgttttgattttcagGCAATACTGGTGTTGCTGTCATGCTTTTTGAACCCAGATATAAGTTCAATGTGAACAGAATAGAAAGGGAGTCTGGGGTCAAATTTGAACATATCTCTGC
ttttgat putative branch site (score: 44)
ttttc CT-rich tract
ttttgatttt TA-rich tract