1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtatgccttcttgttttacttgatctatctgtgggttccattattcaaatgtttgattgctctgcttacatgatcttctttgccttttatcagATACTGGTCTTGCCACCTTATCAAGGTGAAGGCCATGGACTTCGTCTTCTTGAGACGATCAATTCTATTTCTGAGTCTGAGAACATATACGATGTGACCA
species | Oryza sativa |
transcript | LOC_Os09g17850.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: TTCATCATTTTTATCACTACCCTGAGAGCACTCGCCTGCGGATCAGCCAG ATACTGGTCTTGCCACCTTATCAAGGTGAAGGCCATGGACTTCGTCTTCTT
genomic: TTCATCATTTTTATCACTACCCTGAGAGCACTCGCCTGCGGATCAGCCAGgtatgccttc ... cttttatcagATACTGGTCTTGCCACCTTATCAAGGTGAAGGCCATGGACTTCGTCTTCTT
cattattcaaatgtttgattgctctgcttacatgatcttctttgccttttatcagATACTGGTCTTGCCACCTTATCAAGGTGAAGGCCATGGACTTCGTCTTCTTGAGACGATCAATTCTATTTCTGAGTCTGAGAACATATACGATGTGACCA
tgcttac putative branch site (score: 2)
tcttctttgcctttta putative PPT
aaatgttt TA-rich tract