1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaagcatcccttcatttccattggtgtaggtgtcgccaatggtattcctgcacatcacagtaggacttttgtttctagatgaatttgttgtgtttaattttttttttttgtgctatcatctgtgttgccatccagGATTCTCTAGAAAAGACAATTAATCAGAATGAGAATCTATCTGCATCTGTGCATGAACTTGTTGATATCAATTGGTCCTACCAGGATCTTCTACTTGAAC
species | Oryza sativa |
transcript | LOC_Os08g01390.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: ACTTCTCTGAACTTGAAGAGTTGTTGATCAAAGAAAAGGCCTTTTTTGAG GATTCTCTAGAAAAGACAATTAATCAGAATGAGAATCTATCTGCATCTGTGEST: gi|58674380|gb|CK063066.1|CK063066
genomic: ACTTCTCTGAACTTGAAGAGTTGTTGATCAAAGAAAAGGCCTTTTTTGAGgtaagcatcc ... tgccatccagGATTCTCTAGAAAAGACAATTAATCAGAATGAGAATCTATCTGCATCTGTG
EST: ACTTCTCTGAACTTGAAGAGTTGTTGATCAAAGAAAAGGCCTTTTTTGAG GATTCTCTAGAAAAGACAATTAATCAGAATGAGAATCTATCTGCATCTGTG
genomic: ACTTCTCTGAACTTGAAGAGTTGTTGATCAAAGAAAAGGCCTTTTTTGAGgtaagcatcc ... tgccatccagGATTCTCTAGAAAAGACAATTAATCAGAATGAGAATCTATCTGCATCTGTG
gaatttgttgtgtttaattttttttttttgtgctatcatctgtgttgccatccagGATTCTCTAGAAAAGACAATTAATCAGAATGAGAATCTATCTGCATCTGTGCATGAACTTGTTGATATCAATTGGTCCTACCAGGATCTTCTACTTGAAC
gtttaat putative branch site (score: 2)
tttaattttttttttt TA-rich tract