1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' |
gtaagaatgttgcattgtctactacagttgtataaatactctctgcaattttatacgatgatgtttcaatttgaatatattgattttgtttgtgccttcaaagATACCCTGTCTTGGAGACTATACAAAAGTACCTCTGGCCTCGTCTGTGTAAACTTGATCAACAAACACT
species | Oryza sativa |
transcript | LOC_Os05g37350.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: GTGCCAATTCAACCCCTCCCTGAATCTCTTCAGTTACACCTTCTGGAGCT ATACCCTGTCTTGGAGACTATACAAAAGTACCTCTGGCCTCGTCTGTGTAAEST: gi|300216119|gb|HO087904.1|HO087904
genomic: GTGCCAATTCAACCCCTCCCTGAATCTCTTCAGTTACACCTTCTGGAGCTgtaagaatgt ... gccttcaaagATACCCTGTCTTGGAGACTATACAAAAGTACCTCTGGCCTCGTCTGTGTAA
EST: GTGCCAATTCAACCCCTCCCTGAATCTCTTCAGTTACACCTTCTGGAGCT ATACCCTGTCTTGGAGACTATACAAAAGTACCTCTGGCCTCGTCTGTGTAAEST: gi|300216134|gb|HO087919.1|HO087919
genomic: GTGCCAATTCAACCCCTCCCTGAATCTCTTCAGTTACACCTTCTGGAGCTgtaagaatgt ... gccttcaaagATACCCTGTCTTGGAGACTATACAAAAGTACCTCTGGCCTCGTCTGTGTAA
EST: GTGCCAATTCAACCCCTCCCTGAATCTCTTCAGTTACACCTTCTGGAGCT ATACCCTGTCTTGGAGACTATACAAAAGTACCTCTGGCCTCGTCTGTGTAA
genomic: GTGCCAATTCAACCCCTCCCTGAATCTCTTCAGTTACACCTTCTGGAGCTgtaagaatgt ... gccttcaaagATACCCTGTCTTGGAGACTATACAAAAGTACCTCTGGCCTCGTCTGTGTAA
ttttatacgatgatgtttcaatttgaatatattgattttgtttgtgccttcaaagATACCCTGTCTTGGAGACTATACAAAAGTACCTCTGGCCTCGTCTGTGTAAACTTGATCAACAAACACT
tattgat putative branch site (score: 9)
tgccttc putative PPT
tttcaatttgaatata TA-rich tract