1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtaagtaaacagtttctctttattcgcccgacagaacacccatgagtcatgcctcatttcatccttttcttttttgcatcgcatctgatctggtttgctgcatttttcatcccgcagAAACTTCATTGCGACAGAGAATGTCAGCCCTACAGGAACTGAATTTCAGGTTATTCAGCAATCTCAGCAAAATCAATTCTCCGGTTTCTGAGACCTCTTC
species | Oryza sativa |
transcript | LOC_Os05g37170.6 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: AATCGCCGTCTCCGTGCTCTCAGCTCCCTCTGGGCTTCACGTCCTCGCGA AAACTTCATTGCGACAGAGAATGTCAGCCCTACAGGAACTGAATTTCAGGTEST: gi|89163335|gb|CI100225.1|CI100225
genomic: AATCGCCGTCTCCGTGCTCTCAGCTCCCTCTGGGCTTCACGTCCTCGCGAgtaagtaaac ... catcccgcagAAACTTCATTGCGACAGAGAATGTCAGCCCTACAGGAACTGAATTTCAGGT
EST: AATCGCCGTCTCCGTGCTCTCAGCTCCCTCTGGGCTTCACGTCCTCGCGA AAACTTCATTGCGACAGAGAATGTCAGCTCTACAGGAACTGAATTTCAGGT
genomic: AATCGCCGTCTCCGTGCTCTCAGCTCCCTCTGGGCTTCACGTCCTCGCGAgtaagtaaac ... catcccgcagAAACTTCATTGCGACAGAGAATGTCAGCCCTACAGGAACTGAATTTCAGGT
ccttttcttttttgcatcgcatctgatctggtttgctgcatttttcatcccgcagAAACTTCATTGCGACAGAGAATGTCAGCCCTACAGGAACTGAATTTCAGGTTATTCAGCAATCTCAGCAAAATCAATTCTCCGGTTTCTGAGACCTCTTC
atctgat putative branch site (score: 4)
tttttcatccc putative PPT
atttttcat TA-rich tract