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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttactatcactgtgtccacactactttctatgattctcaaattatgtaattgctgacaaggttttgccttgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCATCAAATCTCGAAGATGCCTAATCTTGCATTCACCATTGCAAACAAGACAT

Basic information

species Oryza sativa
transcript LOC_Os05g04630.1
intron # 9
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os05g04630.6 (Oryza sativa), 3'ss of exon 8
lower sequence: GRMZM2G123029_T01 (Zea mays), 3'ss of exon 5
------------------------------------gttactatcactgtgtccacact-----actttctatgattctcaaattatgtaattgctgacaaggttttgcct-------tgcattc--cagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCATCAAATCTCGAAGATGCCTAATCTTGCATTCACCATTGCAAACAAGACAT
                                      | ||    || || |||   |     |   | | || |    | ||    |||  | ||||| | || |||||       ||||| |  ||| | ||||||||||| || |||||||| ||||| ||||| |||||||||||  | ||||| |||||||| |  ||||| |||||||| ||||||||||| |
gtaaccaaactaacgatttactctgcatcttttttttcttcttcttctttggccaatttcttggatcgtatctgttgtatatatataataaccggtgacaggattctgcctgtgttcttgcatgcaccagCTGTGTGAGCGTCTGCCGAGCCCCAACGGAGAGTCAACAGTCAGCTGCCAGGAGATCTCCAAGATGCCCAGCCTTGCGTTCACCATCGCAAACAAGACCT
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|89169212|gb|CI038719.1|CI038719
EST:     AGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|86908549|gb|CI318920.1|CI318920
EST:     AAAACG-ACGAGC-GATATTGAA-TATGCTAATCAG                         -TATGTGAGCGTCTACCAAGCCCCAAT-GAGAATCAACTGTCAGCTGCCAT
genomic: AAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|88845391|gb|CI084316.1|CI084316
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|157652007|gb|EX451641.1|EX451641
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|86524921|gb|CI165127.1|CI165127
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|86886521|gb|CI322753.1|CI322753
EST:     TTATGCTAATCAG                         -TATGT-AGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCT-CCAT
genomic: TTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|218480797|gb|FG967575.1|FG967575
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29665938|gb|CB662213.1|CB662213
EST:     AGCTACGCGAAAATAAATCGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTTTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|88844078|gb|CI001135.1|CI001135
EST:     AGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|86870823|gb|CI326654.1|CI326654
EST:     TAAAACGAAGGAGCCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGACAT
genomic: TAAAACGAAGGAG-CTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29622575|gb|CB627586.1|CB627586
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|86430400|gb|CI082823.1|CI082823
EST:     GATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: GATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|88262339|gb|CI366113.1|CI366113
EST:     TATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: TATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|218495527|gb|FG960510.1|FG960510
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|88571517|gb|CI662890.1|CI662890
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|33794273|gb|CF323024.1|CF323024
EST:     GAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: GAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|88571516|gb|CI662889.1|CI662889
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|33679600|gb|CF307839.1|CF307839
EST:     TATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: TATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|88965888|gb|CI006702.1|CI006702
EST:     AATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29667625|gb|CB663900.1|CB663900
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|218501520|gb|FG954804.1|FG954804
EST:     AGCTACGCGAACATAACACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTAATGTGAGCGTCTA
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTA-TGTGAGCGTCTA
EST: gi|33679509|gb|CF307748.1|CF307748
EST:     TATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: TATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29631563|gb|CB636572.1|CB636572
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|30226990|gb|CB964882.1|CB964882
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29639324|gb|CB644333.1|CB644333
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|218486904|gb|FG965174.1|FG965174
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAGTCAG                         TTATGTGAGCGTCTACCAAGCC
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCC
EST: gi|8251030|gb|AU091273.1|AU091273
EST:     AGTTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAAGCCCCAATGGAGAATCAACTGTCAGCTGCCA
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACC-AAGCCCCAATGGAGAATCAACTGTCAGCTGCCA
EST: gi|29687636|gb|CB683911.1|CB683911
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|88828645|gb|CI073515.1|CI073515
EST:     GAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: GAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|8251118|gb|AU091480.1|AU091480
EST:     AG-TACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|88831270|gb|CI082080.1|CI082080
EST:     GCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: GCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|88245086|gb|CI244935.1|CI244935
EST:     AACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29676405|gb|CB672680.1|CB672680
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29646768|gb|CB651775.1|CB651775
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29622059|gb|CB627070.1|CB627070
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29616094|gb|CB621106.1|CB621106
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATTAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29642217|gb|CB647224.1|CB647224
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29626756|gb|CB631767.1|CB631767
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|88845971|gb|CI084701.1|CI084701
EST:     AGTTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29676558|gb|CB672833.1|CB672833
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29624410|gb|CB629421.1|CB629421
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29680750|gb|CB677025.1|CB677025
EST:     AGCTACGCGAAAATAAACCGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|86497789|gb|CI140422.1|CI140422
EST:     AGTTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|86910997|gb|CI294857.1|CI294857
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29678515|gb|CB674790.1|CB674790
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29616175|gb|CB621187.1|CB621187
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATTAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|88840461|gb|CI079915.1|CI079915
EST:     GAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: GAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|86851173|gb|CI312574.1|CI312574
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29676213|gb|CB672488.1|CB672488
EST:     AGCTACGCGAAAATAAAACGAAGGAGCGGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTTTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|58695321|gb|CK084008.1|CK084008
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29634210|gb|CB639219.1|CB639219
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|86417286|gb|CI031495.1|CI031495
EST:     AACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|89182992|gb|CI003056.1|CI003056
EST:     CGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: CGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29628164|gb|CB633175.1|CB633175
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|218491254|gb|FG966852.1|FG966852
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|58695903|gb|CK084590.1|CK084590
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29633123|gb|CB638132.1|CB638132
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|38565723|gb|CK085176.1|CK085176
EST:     AACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29665939|gb|CB662214.1|CB662214
EST:     AGGTACGCGAAAATAAATCGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGATGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|87012926|gb|CI297153.1|CI297153
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCT
EST: gi|86496558|gb|CI139191.1|CI139191
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29632396|gb|CB637405.1|CB637405
EST:     GAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: GAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|86417846|gb|CI032055.1|CI032055
EST:     GCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: GCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|33680485|gb|CF308724.1|CF308724
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29616329|gb|CB621341.1|CB621341
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|88841311|gb|CI080765.1|CI080765
EST:     AGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29622577|gb|CB627588.1|CB627588
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29630526|gb|CB635535.1|CB635535
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|58592698|gb|CF991006.1|CF991006
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATGGTGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29629202|gb|CB634213.1|CB634213
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|88844927|gb|CI022281.1|CI022281
EST:     CTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: CTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|218491379|gb|FG950252.1|FG950252
EST:     TAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: TAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29680078|gb|CB676353.1|CB676353
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29678523|gb|CB674798.1|CB674798
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29626868|gb|CB631879.1|CB631879
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|218498507|gb|FG959135.1|FG959135
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|8251136|gb|AU091499.1|AU091499
EST:     CTGATATTTNAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCCAATGGAGAATCAACTGTCAGCTGCCA
genomic: CTGATA-TTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAG-CCCCAATGGAGAATCAACTGTCAGCTGCCA
EST: gi|86890218|gb|CI321395.1|CI321395
EST:     TGATATTGAATTATGGTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: TGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|88960424|gb|CI006385.1|CI006385
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|8251276|gb|AU091474.1|AU091474
EST:     AG-TACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29678524|gb|CB674799.1|CB674799
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29639464|gb|CB644473.1|CB644473
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29622720|gb|CB627731.1|CB627731
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29615432|gb|CB620444.1|CB620444
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|33684584|gb|CF312823.1|CF312823
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|86903661|gb|CI300515.1|CI300515
EST:     TATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: TATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29615279|gb|CB620291.1|CB620291
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|86431115|gb|CI083538.1|CI083538
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29628864|gb|CB633875.1|CB633875
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|38469795|gb|CF953926.1|CF953926
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|33654352|gb|CF276966.1|CF276966
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29678429|gb|CB674704.1|CB674704
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|38565650|gb|CK085103.1|CK085103
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|86889449|gb|CI317249.1|CI317249
EST:     AATTATGCTAATCAG                         T-ATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|29628863|gb|CB633874.1|CB633874
EST:     AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: AGCTACGCGAAAATAAAACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT
EST: gi|33794106|gb|CF322943.1|CF322943
EST:     ACGAAGGAGCTGATATTGAATTATGCTAATCAG                         TTATGTGAGCGTCTACCAAGCCNCAATGGAGAATCAACTGTCAGCTGCCAT
genomic: ACGAAGGAGCTGATATTGAATTATGCTAATCAGgttactatca ... tgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCAT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttctatgattctcaaattatgtaattgctgacaaggttttgccttgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCATCAAATCTCGAAGATGCCTAATCTTGCATTCACCATTGCAAACAAGACAT
                          tgctgac  putative branch site (score: 2)
                                     ttttgcctt  putative PPT
            tcaaattatgtaatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gttactatcactgtgtccacactactttctatgattctcaaattatgtaattgctgacaaggttttgccttgcattccagTTATGTGAGCGTCTACCAAGCCCCAATGGAGAATCAACTGTCAGCTGCCATCAAATCTCGAAGATGCCTAATCTTGCATTCACCATTGCAAACAAGACAT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG