1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaagaatgcttctcactcacgggaatgctgtactgagtaccaattttcatgcatgtgtataacttttctggttatggcagGATACCGGTCACAATGCAAGAGACAAAAAGTCCTGTAAGATTGTTTCATGCATGAGGGGGAAAAATATGATTACAACTGG
species | Oryza sativa |
transcript | LOC_Os03g55560.2 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: CATTCTCCCACTGGACTTAAATCCACC GATACCGGTCACAATGCAAGAGACAAAAAGTCCTGTAAGATTGTTTCATGCEST: gi|2317514|gb|C22568.1|C22568
genomic: CATTCTCCCACTGGACTTAAATCCACCgtaagaatgc ... gttatggcagGATACCGGTCACAATGCAAGAGACAAAAAGTCCTGTAAGATTGTTTCATGC
EST: ACTTCAACCAGCACAGTGCTTTACATTCTCCCACTGGACTTAAATCCACC GATACCGGTCACAATGCAAGAGACAAAAAGTCCTGTAAGATTGTTTCATGCEST: gi|29615115|gb|CB620128.1|CB620128
genomic: ACTTCAACCAGCACAGTGCTTTACATTCTCCCACTGGACTTAAATCCACCgtaagaatgc ... gttatggcagGATACCGGTCACAATGCAAGAGACAAAAAGTCCTGTAAGATTGTTTCATGC
EST: ACTTCAACCAGCACAGTGCTTTACATTCTCCCACTGGACTTAAATCCACC GATACCGGTCACAATGCAAGAGACAAAAAGTCCTGTAAGATTGTTTCATGCEST: gi|2317464|gb|C22518.1|C22518
genomic: ACTTCAACCAGCACAGTGCTTTACATTCTCCCACTGGACTTAAATCCACCgtaagaatgc ... gttatggcagGATACCGGTCACAATGCAAGAGACAAAAAGTCCTGTAAGATTGTTTCATGC
EST: ACTTCAACCAGCACAGTGCTTTACATTCTCCCACTGGACTTAAATCCACC GATACCGGTCACAATGCAAGAGACAAAAAGTCCTGTAAGATTGTTTCATGCEST: gi|29661683|gb|CB657958.1|CB657958
genomic: ACTTCAACCAGCACAGTGCTTTACATTCTCCCACTGGACTTAAATCCACCgtaagaatgc ... gttatggcagGATACCGGTCACAATGCAAGAGACAAAAAGTCCTGTAAGATTGTTTCATGC
EST: ACTTCAACCAGCACAGTGCTTTACATTCTCCCACTGGACTTAAATCCACC GATACCGGTCACAATGCAAGAGACAAAAAGTCCTGTAAGATTGTTTCATGCEST: gi|2317516|gb|C22570.1|C22570
genomic: ACTTCAACCAGCACAGTGCTTTACATTCTCCCACTGGACTTAAATCCACCgtaagaatgc ... gttatggcagGATACCGGTCACAATGCAAGAGACAAAAAGTCCTGTAAGATTGTTTCATGC
EST: ACTTCAACCAGCACAGTGCTTTACATTCTCCCACTGGACTTAAATCCACC GATACCGGTCACAATGCAAGAGACAAAAAGTCCTGTAAGATTGTTTCATGC
genomic: ACTTCAACCAGCACAGTGCTTTACATTCTCCCACTGGACTTAAATCCACCgtaagaatgc ... gttatggcagGATACCGGTCACAATGCAAGAGACAAAAAGTCCTGTAAGATTGTTTCATGC
tgctgtactgagtaccaattttcatgcatgtgtataacttttctggttatggcagGATACCGGTCACAATGCAAGAGACAAAAAGTCCTGTAAGATTGTTTCATGCATGAGGGGGAAAAATATGATTACAACTGG
gtataac putative branch site (score: 10)
tataactttt TA-rich tract