1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
...tggacggtggtggttgaaaagttgtgggctatgaagggcactatttgcatatgcctgcatttatgatttttgggctgatctcataatgttcaccctgcagGTTGTTTCCTGTCCTTGTGCACTCGGATTAGCTACCCCTACAGCTATTTTGATAGGAACTTCACTGG
species | Oryza sativa |
transcript | LOC_Os03g08070.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: CAGACGGGGATTCATTACTATTGAGCTTGAAGCTCGCTGTGGATGTACTT GTTGTTTCCTGTCCTTGTGCACTCGGATTAGCTACCCCTACAGCTATTTTG
genomic: CAGACGGGGATTCATTACTATTGAGCTTGAAGCTCGCTGTGGATGTACTTgtaagtagtc ... caccctgcagGTTGTTTCCTGTCCTTGTGCACTCGGATTAGCTACCCCTACAGCTATTTTG
tgcatatgcctgcatttatgatttttgggctgatctcataatgttcaccctgcagGTTGTTTCCTGTCCTTGTGCACTCGGATTAGCTACCCCTACAGCTATTTTGATAGGAACTTCACTGG
ggctgat putative branch site (score: 30)
ttcaccct putative PPT
atttatgattttt TA-rich tract