1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtacatcatcttgtcatctcttaagtagtactgtagtatcgatcttttcatctgcatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatactgtccttacttgtgcatatatgctttttctttcttcttttgtttagGTGATCGCGCCAACGATGAAGAGAAATTTATCTTTGGCCATCTGAGCAAAGCAATATTAATTTACATAGCCAGTCACTTCCCAGGTCACATTAAAGAGTG
species | Oryza sativa |
transcript | LOC_Os02g55770.3 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: AGCGGCCGCCGCTGCCGCTGGAGGCAGCGCCCGTGGGACTGGTGGTACAG GTGATCGCGCCAACGATGAAGAGAAATTTATCTTTGGCCATCTGAGCAAAG
genomic: AGCGGCCGCCGCTGCCGCTGGAGGCAGCGCCCGTGGGACTGGTGGTACAGgtacatcatc ... ttttgtttagGTGATCGCGCCAACGATGAAGAGAAATTTATCTTTGGCCATCTGAGCAAAG
tatatatactgtccttacttgtgcatatatgctttttctttcttcttttgtttagGTGATCGCGCCAACGATGAAGAGAAATTTATCTTTGGCCATCTGAGCAAAGCAATATTAATTTACATAGCCAGTCACTTCCCAGGTCACATTAAAGAGTG
tccttac putative branch site (score: 31)
tatatgctttttcttt putative PPT
tttttcttt TA-rich tract