1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtatgctctacatcggtaaatggacacatgctttcggccctttgccaattgacatgtcctctatgtgtggacacttaccaatgtactttactgttgtgtagGCTATCAAAGAGAACTTCCGTATTACAAGTGATGATAAGGTAATATAGCAAATCTTCTTTTTCACTCAAGCACAAAAACAAATATACCATTACTAGGATT
species | Oryza sativa |
transcript | LOC_Os02g07880.2 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: GGTCGTATAGAGCTATTGATGTTACCTATGCACTCTTGAAGAACATAACG GCTATCAAAGAGAACTTCCGTATTACAAGTGATGATAAGGTAATATAGCAA
genomic: GGTCGTATAGAGCTATTGATGTTACCTATGCACTCTTGAAGAACATAACGgtatgctcta ... tgttgtgtagGCTATCAAAGAGAACTTCCGTATTACAAGTGATGATAAGGTAATATAGCAA
aattgacatgtcctctatgtgtggacacttaccaatgtactttactgttgtgtagGCTATCAAAGAGAACTTCCGTATTACAAGTGATGATAAGGTAATATAGCAAATCTTCTTTTTCACTCAAGCACAAAAACAAATATACCATTACTAGGATT
cacttac putative branch site (score: 9)
ctttact putative PPT
tacttta TA-rich tract