1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtaagtcaaattcaatcaatttctttcctgcaaattttaaacacattcaattccttaatcacaggatcagggtgtttgcatttaatgttgagctctaacatcttggttcggaagataaacatctcctttgttacattgtagGTGCCAGCCTTCTTGTATATCAGCTTTTTATCTACGGTTGGGTTGATAAAATTCTTGGACCTATCCACTCAACCCGCATTTCAGCG
species | Oryza sativa |
transcript | LOC_Os12g03860.4 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: TGGACTCAGCTTTTCATCTAAAGATGTTGGGCAAGTTCTTGCAGTGGCAG GTGCCAGCCTTCTTGTATATCAGCTTTTTATCTACGGTTGGGTTGATAAAAEST: gi|33795491|gb|CF323615.1|CF323615
genomic: TGGACTCAGCTTTTCATCTAAAGATGTTGGGCAAGTTCTTGCAGTGGCAGgtaagtcaaa ... tacattgtagGTGCCAGCCTTCTTGTATATCAGCTTTTTATCTACGGTTGGGTTGATAAAA
EST: TGGACTCAGCTTTTCATCTAAAGATGTTGGGCAAGTTCTTGCAGTGGCAG GTGCCAGCCTTCTTGTATATCAGC
genomic: TGGACTCAGCTTTTCATCTAAAGATGTTGGGCAAGTTCTTGCAGTGGCAGgtaagtcaaa ... tacattgtagGTGCCAGCCTTCTTGTATATCAGC
gttgagctctaacatcttggttcggaagataaacatctcctttgttacattgtagGTGCCAGCCTTCTTGTATATCAGCTTTTTATCTACGGTTGGGTTGATAAAATTCTTGGACCTATCCACTCAACCCGCATTTCAGCG
ctctaac putative branch site (score: 2)
tctcctttgtt putative PPT
aagataaa TA-rich tract