1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaagtagtcctcctccctgaaaccctgaactgaaagtaacaacatttgctcacagcatgctgatctgattgattttcatctgctttccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCTCCTACCATGGCAAATTCAGCTTCGATTGTTTCACCCACAAGAAGGCCG
species | Oryza sativa |
transcript | LOC_Os11g08300.2 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGGCGGAGTCGGCGACAGCGGGATCGGEST: gi|86849392|gb|CI297833.1|CI297833
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTT-GGCGGAGTCGGCGACAGCGGGATCGG
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|38468735|gb|CF952866.1|CF952866
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|86878350|gb|CI319601.1|CI319601
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|29639823|gb|CB644832.1|CB644832
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|29659085|gb|CB655360.1|CB655360
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|58587745|gb|CF986053.1|CF986053
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|88994430|gb|CI117384.1|CI117384
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: CTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|29643719|gb|CB648726.1|CB648726
genomic: CTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|29665741|gb|CB662016.1|CB662016
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|86832729|gb|CI345144.1|CI345144
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: AAATGATGTTG-CCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|86903496|gb|CI322979.1|CI322979
genomic: AAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: -GTCCAATGTCCCAGCA-GAGGAATGCTT-TAAATGAT-TTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTC-GCGACAGCGGGATCGGCEST: gi|86417498|gb|CI031707.1|CI031707
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|218497882|gb|FG958703.1|FG958703
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|29621581|gb|CB626592.1|CB626592
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCGTGCAT TTTGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|58687760|gb|CK076447.1|CK076447
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|29680880|gb|CB677155.1|CB677155
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|29670820|gb|CB667095.1|CB667095
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|88222623|gb|CI222579.1|CI222579
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|88964437|gb|CI055133.1|CI055133
genomic: TGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|86882644|gb|CI327324.1|CI327324
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: CCCACCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTCCCATTTGCCGGAGTCGGCGACAGCGGGATCGGCEST: gi|29666336|gb|CB662611.1|CB662611
genomic: CCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|18388629|gb|BM421827.1|BM421827
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: GTCCAATGTTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCC-ATCCGCACCT-CCATTT-GCGGAGTCGGCGACAGCGGGATCGGCEST: gi|29633959|gb|CB638968.1|CB638968
genomic: GTCCAATG-TCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|86908680|gb|CI318986.1|CI318986
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGC-GGATCGGCEST: gi|88957464|gb|CI095405.1|CI095405
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|29665740|gb|CB662015.1|CB662015
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|29660176|gb|CB656451.1|CB656451
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|88956891|gb|CI009110.1|CI009110
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|86860190|gb|CI322055.1|CI322055
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGA-GAATGCTTGTAAATGATGTTG-CCTGCAT CTCGCCAATCCGCACCTGCCATTT-GCTGAGTC-GCGACAGCGGGATCGGCEST: gi|58588762|gb|CF987070.1|CF987070
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|86825271|gb|CI359952.1|CI359952
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|88253544|gb|CI352170.1|CI352170
genomic: TTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: CTTGTAAATGATGTTG-CCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|29660181|gb|CB656456.1|CB656456
genomic: CTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|88249499|gb|CI249348.1|CI249348
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: GTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|86418566|gb|CI032775.1|CI032775
genomic: GTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|29645893|gb|CB650900.1|CB650900
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|88907922|gb|CI090518.1|CI090518
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|86871151|gb|CI328353.1|CI328353
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TTTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCGGCAT CTCGCCAATCCGCACCTGCCATTTGGCCGAGTCGGCGACAGCGGGATCGGCEST: gi|94362477|gb|CI052338.1|CI052338
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|86869652|gb|CI322138.1|CI322138
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: GTCCCAGCAGGAGGAATGC-TGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|88835135|gb|CI370438.1|CI370438
genomic: GTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: GAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|89169921|gb|CI039198.1|CI039198
genomic: GAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|29658062|gb|CB654337.1|CB654337
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|88249060|gb|CI248909.1|CI248909
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: AGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTTGGCGACAGCGGGATCGGCEST: gi|88225797|gb|CI225713.1|CI225713
genomic: AGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|29677331|gb|CB673606.1|CB673606
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|88249086|gb|CI248935.1|CI248935
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|33675312|gb|CF303551.1|CF303551
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|29683211|gb|CB679486.1|CB679486
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|86839820|gb|CI343731.1|CI343731
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: GGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGGEST: gi|86870622|gb|CI323498.1|CI323498
genomic: GGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATC-GG
EST: GAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|86859909|gb|CI321902.1|CI321902
genomic: GAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: AGGAATGCTTGTAAATGATGTTG-CCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|58588330|gb|CF986638.1|CF986638
genomic: AGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCEST: gi|86831182|gb|CI297451.1|CI297451
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
EST: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCAT CTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
genomic: TGTCCAATGTCCCAGCAGGAGGAATGCTTGTAAATGATGTTGCCCTGCATgtaagtagtc ... tccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGC
aacatttgctcacagcatgctgatctgattgattttcatctgctttccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCTCCTACCATGGCAAATTCAGCTTCGATTGTTTCACCCACAAGAAGGCCG
ttttcatctgctttcc CT-rich tract
attgatttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagtagtcctcctccctgaaaccctgaactgaaagtaacaacatttgctcacagcatgctgatctgattgattttcatctgctttccaccacagCTCGCCAATCCGCACCTGCCATTTGGCGGAGTCGGCGACAGCGGGATCGGCTCCTACCATGGCAAATTCAGCTTCGATTGTTTCACCCACAAGAAGGCCG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG