1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
...gctaacttatctgcaatatgttcagttgggattgaccatgattattgttgttagaatttaccaactatcttattggtcctgtaactttatgatatttcagAAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTGCTCGTGAGATTTCTTCTGAACCACCATACACAGAATATGTGTCAACTCG
species | Oryza sativa |
transcript | LOC_Os06g02550.2 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: TTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTG AAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTGEST: gi|29638208|gb|CB643217.1|CB643217
genomic: TTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTGgtatggctgg ... gatatttcagAAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTG
EST: TTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTG AAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTGEST: gi|58662294|gb|CK050974.1|CK050974
genomic: TTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTGgtatggctgg ... gatatttcagAAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTG
EST: TNTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTG AAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTGEST: gi|29641486|gb|CB646493.1|CB646493
genomic: TTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTGgtatggctgg ... gatatttcagAAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTG
EST: TTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTG AAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTGEST: gi|58677581|gb|CK066268.1|CK066268
genomic: TTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTGgtatggctgg ... gatatttcagAAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTG
EST: TTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTG AAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTGEST: gi|58657844|gb|CK046524.1|CK046524
genomic: TTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTGgtatggctgg ... gatatttcagAAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTG
EST: -TTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTG AAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTGEST: gi|29658028|gb|CB654303.1|CB654303
genomic: TTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTGgtatggctgg ... gatatttcagAAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTG
EST: TTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTG AAAATTTGCCTAGTTACCAAGGAGCTCCTCAAGATAGCAGATTTTGGACTTEST: gi|58685041|gb|CK073728.1|CK073728
genomic: TTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTGgtatggctgg ... gatatttcagAAAATTTG-CTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTT
EST: CCTTAAGCCTG AAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTGEST: gi|29685601|gb|CB681876.1|CB681876
genomic: CCTTAAGCCTGgtatggctgg ... gatatttcagAAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTG
EST: TTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTG AAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTGEST: gi|58689016|gb|CK077703.1|CK077703
genomic: TTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTGgtatggctgg ... gatatttcagAAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTG
EST: TTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTG AAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTG
genomic: TTTGAGTCACATGCATCAGCGTGGATATTTTCACCGCGACCTTAAGCCTGgtatggctgg ... gatatttcagAAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTG
tgttgttagaatttaccaactatcttattggtcctgtaactttatgatatttcagAAAATTTGCTAGTTACAAAGGAGCTCATCAAGATAGCAGATTTTGGACTTGCTCGTGAGATTTCTTCTGAACCACCATACACAGAATATGTGTCAACTCG
ctgtaac putative branch site (score: 130)
taactttatgatattt TA-rich tract