1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtatgttttctatttaagaggataaccaaaagagttgcattagattttgcattagattcgtatcttacatatatttttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG
species | Oryza sativa |
transcript | LOC_Os05g03480.4 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29665694|gb|CB661969.1|CB661969
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCCATGAAA-CGTTCTCGEST: gi|29680250|gb|CB676525.1|CB676525
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCC-ATGAAAACGTTCTCG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29661037|gb|CB657312.1|CB657312
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29678947|gb|CB675222.1|CB675222
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29637530|gb|CB642539.1|CB642539
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29672430|gb|CB668705.1|CB668705
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29661524|gb|CB657799.1|CB657799
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCEST: gi|29668356|gb|CB664631.1|CB664631
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCC
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29674357|gb|CB670632.1|CB670632
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29668355|gb|CB664630.1|CB664630
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGANAACGTTCTEST: gi|58588211|gb|CF986519.1|CF986519
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCT
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29664861|gb|CB661136.1|CB661136
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATNGAAA-CGTTCTCGEST: gi|29661039|gb|CB657314.1|CB657314
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCAT-GAAAACGTTCTCG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29669233|gb|CB665508.1|CB665508
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGANAACGTTCTCGGEST: gi|29644599|gb|CB649606.1|CB649606
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29662792|gb|CB659067.1|CB659067
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29663795|gb|CB660070.1|CB660070
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCAEST: gi|29637231|gb|CB642240.1|CB642240
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCA
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCANTGAAA-CGTTEST: gi|29642660|gb|CB647667.1|CB647667
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCA-TGAAAACGTT
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGEST: gi|29643546|gb|CB648553.1|CB648553
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTG
EST: GCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCAAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29663209|gb|CB659484.1|CB659484
genomic: GCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29637531|gb|CB642540.1|CB642540
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: ACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29673823|gb|CB670098.1|CB670098
genomic: ACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29642658|gb|CB647665.1|CB647665
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGEST: gi|29671620|gb|CB667895.1|CB667895
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTEST: gi|29664640|gb|CB660915.1|CB660915
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGT
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29663217|gb|CB659492.1|CB659492
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|58595349|gb|CF993657.1|CF993657
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29657681|gb|CB653956.1|CB653956
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29669234|gb|CB665509.1|CB665509
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29659705|gb|CB655980.1|CB655980
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29681462|gb|CB677737.1|CB677737
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29670747|gb|CB667022.1|CB667022
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29672136|gb|CB668411.1|CB668411
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29674356|gb|CB670631.1|CB670631
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29675357|gb|CB671632.1|CB671632
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29666865|gb|CB663140.1|CB663140
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCAEST: gi|29683358|gb|CB679633.1|CB679633
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCA
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29664111|gb|CB660386.1|CB660386
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29664203|gb|CB660478.1|CB660478
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29672648|gb|CB668923.1|CB668923
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29667481|gb|CB663756.1|CB663756
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: GCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29661262|gb|CB657537.1|CB657537
genomic: GCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGEST: gi|58594804|gb|CF993112.1|CF993112
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCGGGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29642661|gb|CB647668.1|CB647668
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TCAGTACTGCACAGAAGTTGGAC-AGCTTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29642659|gb|CB647666.1|CB647666
genomic: TCAGTACTGCACAGAAGTTGGACAAGC-TTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29658881|gb|CB655156.1|CB655156
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGEST: gi|29680932|gb|CB677207.1|CB677207
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29664257|gb|CB660532.1|CB660532
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|33683926|gb|CF312165.1|CF312165
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|428577|gb|D24729.1|D24729
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: GAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|33683556|gb|CF311795.1|CF311795
genomic: GAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29675356|gb|CB671631.1|CB671631
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29665695|gb|CB661970.1|CB661970
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29661040|gb|CB657315.1|CB657315
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29679285|gb|CB675560.1|CB675560
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29664204|gb|CB660479.1|CB660479
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29663798|gb|CB660073.1|CB660073
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29664256|gb|CB660531.1|CB660531
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTTGTTT-GTGCCCCATGAAAACGTTCTCGEST: gi|29661229|gb|CB657504.1|CB657504
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATT-GTTTTGTGCCCCATGAAAACGTTCTCG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCEST: gi|84117533|gb|CD151300.1|CD151300
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTC
EST: ACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29637680|gb|CB642689.1|CB642689
genomic: ACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29671621|gb|CB667896.1|CB667896
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29668395|gb|CB664670.1|CB664670
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGEST: gi|218479296|gb|FG957919.1|FG957919
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29678948|gb|CB675223.1|CB675223
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29669119|gb|CB665394.1|CB665394
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29661172|gb|CB657447.1|CB657447
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29680495|gb|CB676770.1|CB676770
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29658318|gb|CB654593.1|CB654593
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29680494|gb|CB676769.1|CB676769
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29661171|gb|CB657446.1|CB657446
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGEST: gi|29661525|gb|CB657800.1|CB657800
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
EST: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACAC ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
genomic: TTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACgtatgttttc ... tttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGG
agagttgcattagattttgcattagattcgtatcttacatatatttttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG
ttttgac putative branch site (score: 50)
tattttt CT-rich tract
tatcttacatatattt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtatgttttctatttaagaggataaccaaaagagttgcattagattttgcattagattcgtatcttacatatatttttgacacagATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG