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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgtctcctgaaatctgtgttggctacttgttccaaaaattgctgacctgattatctttctttaaaaataaaataaatccttgttctgccagaactaaaacaatctttattttatgtggtcttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTGGCACGATCTACGGACGACTTCAATGGTGCACAACTGAAGGCCGTTTGTG

Basic information

species Oryza sativa
transcript LOC_Os02g56000.1
intron # 8
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os02g56000.2 (Oryza sativa), 3'ss of exon 8
lower sequence: GRMZM2G027282_T01 (Zea mays), 3'ss of exon 8
gtatgtctcctgaaatctgtgttggctacttgttccaaaaattgctgacctgattatctttctttaaaaataaaataaatccttgttctgccagaactaaaacaatctttattttatgtggtcttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTGGCACGATCTACGGACGACTTCAATGGTGCACAACTGAAGGCCGTTTGTG
             |||  |    || | || |  ||        |      | || | |  ||   ||| ||  |  ||   ||      ||| ||  |   | |||| | || | |             ||||||| || || ||||||||||| || || ||||||||||||||||||||||| || || || || || |||||||| || || || ||||| ||||| |
-------------aataagaaagggattctagcccccctccaatccccttcggttttgtggctcccaaactagcactaaaggtt------ccaaaataacgccgatctatgttgtgt-------------agATCCACTCGAGGAAAATGAATGTGAATCCAGATGTCAACTTTGAAGAGTTGGCGCGTTCAACCGATGATTTCAATGGCGCTCAGCTAAAGGCTGTTTGCG

upper sequence: LOC_Os02g56000.2 (Oryza sativa), 3'ss of exon 8
lower sequence: GLYMA20G38030.1 (Glycine max), 3'ss of exon 8
gtatgtctcctgaaatctgtgttggctacttgttccaaaaattgctgacctgattatctttctttaaaaataaaataaatccttgttctgccagaactaaaacaatctttattttatgtggtctt---actctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTGGCACGATCTACGGACGACTTCAATGGTGCACAACTGAAGGCCGTTTGTG
                                                     ||   | ||||||||  | |  |     |||||| | |   ||  | |||| |   |   |  | |    ||   | |  |||||||||| || || ||||||||  |||| |||||||||||||||||  | || || || || || || |||||||| || ||||||||||| |||||||
----------------------------------------------------gtttggtgtctttaaacttcatctgctgacttgtttttc---aaacagaacatttactgactgctctcactttgatatttcagATCCATTCGAGGAAGATGAATGTTCACCCAGATGTCAACTTTGAAGAACTTGCTCGGTCCACAGATGATTTCAATGGAGCTCAACTGAAGGCTGTTTGTG

upper sequence: LOC_Os02g56000.2 (Oryza sativa), 3'ss of exon 8
lower sequence: GLYMA03G39500.1 (Glycine max), 3'ss of exon 8
gtatgtctcctgaaatctgtgttggctacttgttccaaaaattgctgacctgattatctttctttaaaaataaaataaatccttgttctgccagaactaaaacaatctttattttatgtggtcttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTGGCACGATCTACGGACGACTTCAATGGTGCACAACTGAAGGCCGTTTGTG
                                                  || | |||||    |   | |     | ||  ||  |||| |||||||         | | ||||      |  ||   |||||||||||  | |||||||||||  |||| ||||||||||||||||| || || || || || || || |||||||  |||||||| || || || ||||
-----------------------------------------------gtttggt-atcttcaaattttatttgctgacattttttctctgacagaact---tttgcttatgtttttcacattaatatcatagATCCATTCTCGGAAAATGAATGTTCACCCCGATGTCAACTTTGAAGAATTAGCTCGGTCCACAGATGATTTCAATGCAGCACAACTTAAAGCTGTCTGTG

upper sequence: LOC_Os02g56000.2 (Oryza sativa), 3'ss of exon 8
lower sequence: GLYMA10G29250.1 (Glycine max), 3'ss of exon 8
gtatgtctcctgaaatctgtgttggctacttgttccaaaaattgctgacctgattatctttctttaaaaataaaataaatccttgttctgccagaactaaaacaatctttattttatgtggtcttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTGGCACGATCTACGGACGACTTCAATGGTGCACAACTGAAGGCCGTTTGTG
                                                  |  || |||| |       |     | |  | ||||||   || |||    ||   ||    |   | || |   | | ||||| |||||||| || ||||||||  |||| |||||||||||||||||  | || || || || || || |||||||| |||||||||||||| || ||||
------------------------------------------------gtttgttgtcttccaaactttacctgctgacacattgttcaatcaaaacatttactgactaccctcactttgat---attttagATTCATTCAAGGAAGATGAATGTTCACCCAGATGTCAACTTTGAAGAACTTGCCCGGTCCACAGATGATTTCAATGGCGCACAACTGAAGGCTGTCTGTG

upper sequence: LOC_Os02g56000.2 (Oryza sativa), 3'ss of exon 8
lower sequence: Vv14s0060g02260.t01 (Vitis vinifera), 3'ss of exon 8
gtatgtctcctgaaatctgtgttggctacttgttccaaaaattgctgacctgattatctttctttaaaa-ataaaataaatccttgttctgccagaactaaaacaatctttattttatgtggtcttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTGGCACGATCTACGGACGACTTCAATGGTGCACAACTGAAGGCCGTTTGTG
                                        ||  ||    ||| ||| ||  | || |  || | | |        |  |  |||| ||   |    || |  || |  | || ||  | |||||||| || ||||| |||| |||  | || |||||||| ||||||||  |||| ||||| || || || |||||||| ||||||||||| || |||||||
--------------------------------------gtatgtcttcaatgaatattttcttctagatcattacacattgatcactctttgcagagctcttattgactct--ttcacattgtatt--tgtagATCCACTCGAGAAAGATGACTGTTCATCCGGATGTCAATTTTGAAGAACTGGCTCGATCCACAGATGATTTCAATGGGGCACAACTGAAAGCTGTTTGTG

upper sequence: LOC_Os02g56000.2 (Oryza sativa), 3'ss of exon 8
lower sequence: PP1S340_7V6.1 (Physcomitrella patens), 3'ss of exon 8
-----------------------gtatgtctcctgaaatc-tgtgttggctacttgttccaaaaattgctgacctgattatctttctttaaaaataaaataaatccttgttctgccagaactaaaacaatctttattttatgtggtcttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTGGCACGATCTACGGACGACTTCAATGGTGCACAACTGAAGGCCGTTTGTG
                       | |  |     |  ||  ||   ||| ||     ||          |||| || || |       ||  | | |  || |  |||  |           |     |    | || |  |   |  |||   |||| ||||| || ||||||||| |||  ||||||||||||||||| |||||||| || || || || ||||| || || || ||| ||||||| || ||| 
gtatgaatacttgacacgggcatgcacatgcaaagtgattatgaactgggtaaagcctcttgtttgcaatgacgtgcttgttcagtcatatgatttacgtagaggcttactacttagttttcattttcaataattttcttggactttctaccgcagATTCATTCGAGGAAAATGAATTTAAGGCCTGATGTCAACTTTGAGGAGTTGGCTCGCTCAACAGATGACTTTAACGGAGCTCAATTGAAGGCTGTGTGTA

upper sequence: LOC_Os02g56000.2 (Oryza sativa), 3'ss of exon 8
lower sequence: PP1S218_133V6.1 (Physcomitrella patens), 3'ss of exon 8
---------------------------------------gtatgtctcctgaaatctgtgttggctacttgttccaaaaattgctgacctgatt-atctttctttaaaaata------aaataaatccttgttctgccagaactaaaacaatctttattttatgtggtcttac-tctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTGGCACGATCTACGGACGACTTCAATGGTGCACAACTGAAGGCCGTTTGTG
                                       | ||    |   |   ||    |  | |  | || ||   |||| |   ||| || ||| |||| |||  |||      | | | ||  || |         |    | |||||  | |   |||   | | || || |||| |||||||| ||||||||||||     ||||||||||||||| |||||||| || || ||||||||||| || || || ||| | ||||| || ||  
gttcggataaacaatagcgcttggtagactttgaagtttgcataatcctgtacccctaacctaaccatgt-tttcacctattgttttactgtttgatccttctataattataccacctatacagatttttatgagcaggatatcttatcaatcactgt--aatgaactttcacctccagATTCATTCAAGGAAAATGAATGTACGGGGTGATGTCAACTTTGAGGAGTTGGCCCGTTCCACGGACGACTTTAACGGAGCCCAATTAAAGGCTGTATGCA

upper sequence: LOC_Os02g56000.2 (Oryza sativa), 3'ss of exon 8
lower sequence: EFJ15061 (Selaginella moellendorffii), 3'ss of exon 8
gtatgtctcctgaaatctgtgttggctacttgttccaaaaattgctgacctgattatctttctttaaaaataaaataaatccttgttctgccagaactaaaaca-atctttattttatgtggtcttactc-tagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTGGCACGATCTACGGACGACTTCAATGGTGCACAACTGAAGGCCGTTTGTG
                                                                                  | ||||| ||    ||| |    || || ||   | ||  | |  ||   |||| || || || ||||||| ||| | | | ||||| |||||||| ||| |||| || || |||||||||||||||||||| ||||| |||||||| || |
--------------------------------------------------------------------------------gttcgttcttcctcgtctagactgtattttgatcgaaagtcttttcgcttgcagATTCACTCGAGGAAAATGACTGTGAGCTCCGATGTGAACTTTGAGGAGCTGGCGCGCTCCACGGACGACTTCAATGGTGCTCAACTAAAGGCCGTGTGCG

upper sequence: LOC_Os02g56000.2 (Oryza sativa), 3'ss of exon 8
lower sequence: EFJ37626 (Selaginella moellendorffii), 3'ss of exon 8
gtatgtctcctgaaatctgtgttggctacttgttccaaaaattgctgacctgattatctttctttaaaaataaaataaatccttgttctgccagaactaaaaca-atctttattttatgtggtcttactc-tagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTGGCACGATCTACGGACGACTTCAATGGTGCACAACTGAAGGCCGTTTGTG
                                                                                  | ||||| ||    ||| |    || || ||   | ||  | || ||   |||| || || || ||||||| ||| | | | ||||| |||||||| ||| |||| || || |||||||||||||||||||| ||||| |||||||| || |
--------------------------------------------------------------------------------gttcgttcttcctcgtctagactgtattttgatcgaaagtatttttgcttgcagATTCACTCGAGGAAAATGACTGTGAGCTCCGATGTGAACTTTGAGGAGCTGGCGCGCTCCACGGACGACTTCAATGGTGCTCAACTAAAGGCCGTGTGCG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86545689|gb|CI185895.1|CI185895
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86415267|gb|CI069670.1|CI069670
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGCAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|89163467|gb|CI100357.1|CI100357
EST:     TCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: TCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86413550|gb|CI019135.1|CI019135
EST:     TTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCGA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: TTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|29660288|gb|CB656563.1|CB656563
EST:     AAATCGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88832202|gb|CI017436.1|CI017436
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86414626|gb|CI069029.1|CI069029
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86497811|gb|CI140444.1|CI140444
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88844827|gb|CI022181.1|CI022181
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTGGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|89168359|gb|CI109563.1|CI109563
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|29682547|gb|CB678822.1|CB678822
EST:     AAATTGAGTTCCCTCATCCATCGGAAGAAGCTCGAGATAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88257404|gb|CI359792.1|CI359792
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88967851|gb|CI098093.1|CI098093
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86415268|gb|CI069671.1|CI069671
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGCAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|87031011|gb|CI270159.1|CI270159
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86890008|gb|CI319997.1|CI319997
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|89183716|gb|CI046281.1|CI046281
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86412697|gb|CI067102.1|CI067102
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|89186657|gb|CI114366.1|CI114366
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|89164849|gb|CI101937.1|CI101937
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88828977|gb|CI073847.1|CI073847
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAGCCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|8859408|gb|AU096726.1|AU096726
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGA-TTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|89198421|gb|CI007481.1|CI007481
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86424028|gb|CI062789.1|CI062789
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|29626138|gb|CB631149.1|CB631149
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|89167123|gb|CI104409.1|CI104409
EST:     AAATTGAGTTCCCTTATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86435149|gb|CI106382.1|CI106382
EST:     AGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|89177338|gb|CI250787.1|CI250787
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86413371|gb|CI067776.1|CI067776
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86432781|gb|CI086392.1|CI086392
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|8527269|gb|AU092084.1|AU092084
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|29661398|gb|CB657673.1|CB657673
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88906488|gb|CI375560.1|CI375560
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86523662|gb|CI163868.1|CI163868
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86413599|gb|CI019184.1|CI019184
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|14192374|gb|AU184585.1|AU184585
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|94362567|gb|CI052686.1|CI052686
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|89187519|gb|CI114479.1|CI114479
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88250010|gb|CI249859.1|CI249859
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|22304809|gb|BQ906031.1|BQ906031
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88852350|gb|CI374118.1|CI374118
EST:     TCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: TCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86602763|gb|CI357127.1|CI357127
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88849565|gb|CI089473.1|CI089473
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|29659490|gb|CB655765.1|CB655765
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88246574|gb|CI246423.1|CI246423
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88253155|gb|CI351781.1|CI351781
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88838458|gb|CI375006.1|CI375006
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86858935|gb|CI275141.1|CI275141
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86489883|gb|CI132516.1|CI132516
EST:     AAATTGAGTTCCCTTATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|89182549|gb|CI113918.1|CI113918
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86490885|gb|CI133518.1|CI133518
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86414336|gb|CI068739.1|CI068739
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86425390|gb|CI070487.1|CI070487
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86600465|gb|CI356222.1|CI356222
EST:     CATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: CATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88971395|gb|CI017709.1|CI017709
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88838342|gb|CI373702.1|CI373702
EST:     CATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGGATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: CATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88980148|gb|CI026437.1|CI026437
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86413980|gb|CI068187.1|CI068187
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGCAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86255685|gb|CI066748.1|CI066748
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88221331|gb|CI221287.1|CI221287
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88272104|gb|CI388157.1|CI388157
EST:     ATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: ATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86536747|gb|CI176953.1|CI176953
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|29615761|gb|CB620773.1|CB620773
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88906424|gb|CI375496.1|CI375496
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|89178699|gb|CI391697.1|CI391697
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88273871|gb|CI394277.1|CI394277
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88835519|gb|CI370624.1|CI370624
EST:     GTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: GTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86490630|gb|CI133263.1|CI133263
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86420002|gb|CI054803.1|CI054803
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|11173135|gb|AU164630.1|AU164630
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86436446|gb|CI118168.1|CI118168
EST:     GAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: GAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|29615719|gb|CB620731.1|CB620731
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86593962|gb|CI260191.1|CI260191
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86522782|gb|CI162988.1|CI162988
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|218495770|gb|FG962501.1|FG962501
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|33681969|gb|CF310208.1|CF310208
EST:     ATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: ATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88833193|gb|CI076676.1|CI076676
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|29683382|gb|CB679657.1|CB679657
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88833497|gb|CI076978.1|CI076978
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|29682519|gb|CB678794.1|CB678794
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|89188741|gb|CI115990.1|CI115990
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88835238|gb|CI370541.1|CI370541
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|87018818|gb|CI256703.1|CI256703
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86823621|gb|CI258693.1|CI258693
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86598613|gb|CI355230.1|CI355230
EST:     AGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88908264|gb|CI090857.1|CI090857
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|29615715|gb|CB620727.1|CB620727
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|86522177|gb|CI162383.1|CI162383
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|89185134|gb|CI049680.1|CI049680
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|89197922|gb|CI117400.1|CI117400
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|88967996|gb|CI098238.1|CI098238
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|163923570|gb|EG713311.1|EG713311
EST:     TTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: TTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|29684874|gb|CB681149.1|CB681149
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|33815577|gb|CF333641.1|CF333641
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|29615721|gb|CB620733.1|CB620733
EST:     AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: AAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
EST: gi|33817832|gb|CF334748.1|CF334748
EST:     TTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAA                         ATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG
genomic: TTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAgtatgtctcc ... cttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aatccttgttctgccagaactaaaacaatctttattttatgtggtcttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTGGCACGATCTACGGACGACTTCAATGGTGCACAACTGAAGGCCGTTTGTG
                                            tcttactct  CT-rich tract
                 aactaaaacaatcttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtatgtctcctgaaatctgtgttggctacttgttccaaaaattgctgacctgattatctttctttaaaaataaaataaatccttgttctgccagaactaaaacaatctttattttatgtggtcttactctagATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTGGCACGATCTACGGACGACTTCAATGGTGCACAACTGAAGGCCGTTTGTG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG