1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...agaagtttctttaaaaaatcaaataaatcatgttttcaagcttataatagttcatatttaattaatcgtgtactaattactgttcgcatttcatgtgcagCTGAAAACCACACTTAAAGTTTGACTGCAATGGTTAATGTGACAGGACAAAACGTTATCGAGATAAAAGCGATATGTCATTTTCAGTTTTTCACAGAAAA
species | Oryza sativa |
transcript | LOC_Os01g34620.2 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: AACCAAGTATGGATTTGCCTTCTCCTGTTTGATCTTTTCAT CTGAAAACCACGGGTTAAAGTTTGACTGCAATGGTTAATGTGACAGGACAA
genomic: AACCAAGTATGGATTTGCGTTCTCCTGTTTGATCTTTTCATgtaaggatgg ... tcatgtgcagCTGAAAACCACAC-TTAAAGTTTGACTGCAATGGTTAATGTGACAGGACAA
aatagttcatatttaattaatcgtgtactaattactgttcgcatttcatgtgcagCTGAAAACCACACTTAAAGTTTGACTGCAATGGTTAATGTGACAGGACAAAACGTTATCGAGATAAAAGCGATATGTCATTTTCAGTTTTTCACAGAAAA
tactaat putative branch site (score: 1)
ttcatatttaattaat TA-rich tract