1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaagattatgaataccatcatcccatgttgttagttgccatccttgtttaatgaactatgtttaaacacaatgaaatcataaatttaaacacaatgaagaatgaactatgcttatttgtttcaacatgcatagagacctgggaattaacaagtttatgcaatttcagGGTTCCAATAGGGCAAGGGTATGGTCTTACTGAGACATGTGCTGGAGGAACATTTTCTGAGTATGATGACCCATCTGTTGGTCGCGTTGGTGCTCCACTA
species | Oryza sativa |
transcript | LOC_Os12g07110.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: GGAGCACCTCTATCAGGAGATACCCAGAGATTTATCAATATATGCCTTGG GGTTCCAATAGGGCAAGGGTATGGTCTTACTGAGACATGTGCTGGAGGAACEST: gi|29614988|gb|CB620001.1|CB620001
genomic: GGAGCACCTCTATCAGGAGATACCCAGAGATTTATCAATATATGCCTTGGgtaagattat ... gcaatttcagGGTTCCAATAGGGCAAGGGTATGGTCTTACTGAGACATGTGCTGGAGGAAC
EST: GGAGCACCTCTATCAGGAGATACCCAGAGATTTATCAATATATGCCTTGG GGTTCCAATAGGGCAAGGGTATGGTCTTACTGAGACATGTGCTGGAGGAACEST: gi|29675500|gb|CB671775.1|CB671775
genomic: GGAGCACCTCTATCAGGAGATACCCAGAGATTTATCAATATATGCCTTGGgtaagattat ... gcaatttcagGGTTCCAATAGGGCAAGGGTATGGTCTTACTGAGACATGTGCTGGAGGAAC
EST: GGAGCACCTCTATCAGGAGATACCCAGAGATTTATCAATATATGCCTTGG GGTTCCAATAGGGCAAGGGTATGGTCTTACTGAGACATGTGCTGGAGGAACEST: gi|58030548|gb|CX728091.1|CX728091
genomic: GGAGCACCTCTATCAGGAGATACCCAGAGATTTATCAATATATGCCTTGGgtaagattat ... gcaatttcagGGTTCCAATAGGGCAAGGGTATGGTCTTACTGAGACATGTGCTGGAGGAAC
EST: GGAGCACCTCTATCAGGAGATACCCAGAGATTTATCAATATATGCCTTGG GGTTCCAATAGGGCAAGGGTATGGTCTTACTGAGACATGTGCTGGAGGAACEST: gi|29672201|gb|CB668476.1|CB668476
genomic: GGAGCACCTCTATCAGGAGATACCCAGAGATTTATCAATATATGCCTTGGgtaagattat ... gcaatttcagGGTTCCAATAGGGCAAGGGTATGGTCTTACTGAGACATGTGCTGGAGGAAC
EST: GGAGCACCTCTATCAGGAGATACCCAGAGATTTATCAATATATGCCTTGG GGTTCCAATAGGGCAAGGGTATGGTCTTACTGAGACATGTGCGGGAGGAACEST: gi|29614945|gb|CB619958.1|CB619958
genomic: GGAGCACCTCTATCAGGAGATACCCAGAGATTTATCAATATATGCCTTGGgtaagattat ... gcaatttcagGGTTCCAATAGGGCAAGGGTATGGTCTTACTGAGACATGTGCTGGAGGAAC
EST: GGAGCACCTCTATCAGGAGATACCCAGAGATTTATCAATATATGCCTTGG GGTTCCAATAGGGCAAGGGTATGGTCTTACTGAGACATGTGCTGGAGGAACEST: gi|13420751|gb|AU174841.1|AU174841
genomic: GGAGCACCTCTATCAGGAGATACCCAGAGATTTATCAATATATGCCTTGGgtaagattat ... gcaatttcagGGTTCCAATAGGGCAAGGGTATGGTCTTACTGAGACATGTGCTGGAGGAAC
EST: GGAGCACCTCTATCAGGAGATACCCAGAGATTTATCAATATATGCCTTGG GGTTCCAATAGGGCAAGGGTATGGTCTTACTGAGACATGTGCTGGAGGAAC
genomic: GGAGCACCTCTATCAGGAGATACCCAGAGATTTATCAATATATGCCTTGGgtaagattat ... gcaatttcagGGTTCCAATAGGGCAAGGGTATGGTCTTACTGAGACATGTGCTGGAGGAAC
tatttgtttcaacatgcatagagacctgggaattaacaagtttatgcaatttcagGGTTCCAATAGGGCAAGGGTATGGTCTTACTGAGACATGTGCTGGAGGAACATTTTCTGAGTATGATGACCCATCTGTTGGTCGCGTTGGTGCTCCACTA
aattaac putative branch site (score: 38)
aattaacaagtttat TA-rich tract