1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
gtaatattagataagcatattcgggttcataaatatccttttcttcttttgtgaatgatcgatgacaatgagtatttatctttaccttggtctatttcttgatatcagCCTGTCAAACAATATCCTCATCTTTTTCATGAAAAGTCAATATTTGGGAG
species | Oryza sativa |
transcript | LOC_Os11g04030.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: GGGGAATAGGTCTTGTAGTTGGTCCAGCAATTGGAGGCTACCTCGCGCAG CCTGTCAAACAATATCCTCATCTTTTTCATGAAAAGTCAATATTTGGGAGEST: gi|29674310|gb|CB670585.1|CB670585
genomic: GGGGAATAGGTCTTGTAGTTGGTCCAGCAATTGGAGGCTACCTCGCGCAGgtaatattag ... ttgatatcagCCTGTCAAACAATATCCTCATCTTTTTCATGAAAAGTCAATATTTGGGAG
EST: GGGGAATAGGTCTTGTAGTTGGTCCAGCAATTGGAGGCTACCTCGCGCAG CCTGTCAAACAATATCCTCATCTTTTTCATGAAAAGTCAATATTTGGGAGEST: gi|29644401|gb|CB649408.1|CB649408
genomic: GGGGAATAGGTCTTGTAGTTGGTCCAGCAATTGGAGGCTACCTCGCGCAGgtaatattag ... ttgatatcagCCTGTCAAACAATATCCTCATCTTTTTCATGAAAAGTCAATATTTGGGAG
EST: GGGGAATAGGTCTTGTAGTTGGTCCAGCAATTGGAGGCTACCTCGCGCAG CCTGTCAAACAATATCCTCATCTTTTTCATGAAAAGTCAATATTTGGGAGEST: gi|88411903|gb|CI571395.1|CI571395
genomic: GGGGAATAGGTCTTGTAGTTGGTCCAGCAATTGGAGGCTACCTCGCGCAGgtaatattag ... ttgatatcagCCTGTCAAACAATATCCTCATCTTTTTCATGAAAAGTCAATATTTGGGAG
EST: GGGGAATAGGTCTTGTAGTTGGTCCAGCAATTGGAGGCTACCTCGCGCAG CCTGTCAAACAATATCCTCATCTTTTTCATGAAAAGTCAATATTTGGGAGEST: gi|29678070|gb|CB674345.1|CB674345
genomic: GGGGAATAGGTCTTGTAGTTGGTCCAGCAATTGGAGGCTACCTCGCGCAGgtaatattag ... ttgatatcagCCTGTCAAACAATATCCTCATCTTTTTCATGAAAAGTCAATATTTGGGAG
EST: GGGGAATAGGTCTTGTAGTTGGTCCAGCAATTGGAGGCTACCTCGCGCAG CCTGTCAAACAATATCCTCATCTTTTTCATGAAAAGTCAATATTTGGNGAG
genomic: GGGGAATAGGTCTTGTAGTTGGTCCAGCAATTGGAGGCTACCTCGCGCAGgtaatattag ... ttgatatcagCCTGTCAAACAATATCCTCATCTTTTTCATGAAAAGTCAATATTTGG-GAG
aatgatcgatgacaatgagtatttatctttaccttggtctatttcttgatatcagCCTGTCAAACAATATCCTCATCTTTTTCATGAAAAGTCAATATTTGGGAG
tcttgat putative branch site (score: 4)
tctatttctt CT-rich tract
agtatttatcttta TA-rich tract