1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
gcagtgatctgaactaagattttctcattctatgtgttgctcataaagttatttaatgatgtgctctatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGATGGGTGTTGAAGTGTACCACAACCTGAAG
species | Oryza sativa |
transcript | LOC_Os10g08550.3 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCEST: gi|58675782|gb|CK064469.1|CK064469
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGC
EST: CACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|117224917|gb|CT845976.1|CT845976
genomic: CACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29688336|gb|CB684611.1|CB684611
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58687518|gb|CK076205.1|CK076205
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58604220|gb|CK014748.1|CK014748
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTEST: gi|33676058|gb|CF304297.1|CF304297
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCT
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|33675547|gb|CF303786.1|CF303786
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTNGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29656140|gb|CB652415.1|CB652415
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29678862|gb|CB675137.1|CB675137
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58597291|gb|CK007819.1|CK007819
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58687904|gb|CK076591.1|CK076591
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTEST: gi|33674962|gb|CF303201.1|CF303201
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATT
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|427989|gb|D24135.1|D24135
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29644081|gb|CB649088.1|CB649088
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29665470|gb|CB661745.1|CB661745
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29679887|gb|CB676162.1|CB676162
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|53553401|gb|CO436313.1|CO436313
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|396941266|gb|HO188475.1|HO188475
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58695790|gb|CK084477.1|CK084477
genomic: TGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATEST: gi|428358|gb|D24506.1|D24506
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCAT
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58679935|gb|CK068622.1|CK068622
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGEST: gi|23513780|gb|BU673306.1|BU673306
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29619828|gb|CB624840.1|CB624840
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29657924|gb|CB654199.1|CB654199
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58684785|gb|CK073472.1|CK073472
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCEST: gi|29668022|gb|CB664297.1|CB664297
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCC
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58588647|gb|CF986955.1|CF986955
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58606067|gb|CK034100.1|CK034100
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAGACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58662698|gb|CK051384.1|CK051384
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|33676198|gb|CF304437.1|CF304437
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|33658241|gb|CF280855.1|CF280855
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: CAACGTCATTAACGGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAEST: gi|30228895|gb|CB966786.1|CB966786
genomic: CAACGTCATTAACGG-TGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCA
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29668592|gb|CB664867.1|CB664867
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58677316|gb|CK066003.1|CK066003
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTEST: gi|29681677|gb|CB677952.1|CB677952
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATT
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|163920149|gb|EG712055.1|EG712055
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58686932|gb|CK075619.1|CK075619
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGEST: gi|58694276|gb|CK082963.1|CK082963
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|30229421|gb|CB967312.1|CB967312
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58671253|gb|CK059939.1|CK059939
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCEST: gi|58673278|gb|CK061964.1|CK061964
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTC
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58683046|gb|CK071733.1|CK071733
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|33676308|gb|CF304547.1|CF304547
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|325494282|gb|JG458806.1|JG458806
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGEST: gi|58681144|gb|CK069831.1|CK069831
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29659230|gb|CB655505.1|CB655505
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|14192326|gb|AU184537.1|AU184537
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58678619|gb|CK067306.1|CK067306
genomic: TTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGACATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGATTCATTCAAGGAGGCCATGEST: gi|29682743|gb|CB679018.1|CB679018
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58693505|gb|CK082192.1|CK082192
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29677116|gb|CB673391.1|CB673391
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29679137|gb|CB675412.1|CB675412
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAAGAGGCCATGAACEST: gi|27554031|gb|CA997931.1|CA997931
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58658241|gb|CK046921.1|CK046921
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAEST: gi|33678253|gb|CF306492.1|CF306492
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCA
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTEST: gi|29668244|gb|CB664519.1|CB664519
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACT
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58673545|gb|CK062231.1|CK062231
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCEST: gi|58603616|gb|CK014144.1|CK014144
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATC
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29678678|gb|CB674953.1|CB674953
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29623734|gb|CB628745.1|CB628745
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|218504551|gb|FG952364.1|FG952364
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|33676730|gb|CF304969.1|CF304969
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29639493|gb|CB644502.1|CB644502
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|218483031|gb|FG953128.1|FG953128
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29629934|gb|CB634943.1|CB634943
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29667979|gb|CB664254.1|CB664254
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|5003018|gb|AU068127.1|AU068127
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|33793332|gb|CF322547.1|CF322547
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAEST: gi|29656696|gb|CB652971.1|CB652971
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGA
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58662604|gb|CK051290.1|CK051290
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29664966|gb|CB661241.1|CB661241
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|88361405|gb|CI605186.1|CI605186
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58673211|gb|CK061897.1|CK061897
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAACGAGGCCATGAAGEST: gi|58603025|gb|CK013553.1|CK013553
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTEST: gi|29659075|gb|CB655350.1|CB655350
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACT
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58663601|gb|CK052287.1|CK052287
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|29684326|gb|CB680601.1|CB680601
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGEST: gi|58686722|gb|CK075409.1|CK075409
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAG
EST: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAG GAGTTCATGATCCTTCCTACTGGGG
genomic: TCAACGTCATTAACGGTGGATCACATGCTGGAAACAAGCTTGCCATGCAGgcagtgatct ... tatattgcagGAGTTCATGATCCTTCCTACTGGGG
ttctcattctatgtgttgctcataaagttatttaatgatgtgctctatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGATGGGTGTTGAAGTGTACCACAACCTGAAG
atttaat putative branch site (score: 344)
ataaagttatttaatg TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gcagtgatctgaactaagattttctcattctatgtgttgctcataaagttatttaatgatgtgctctatattgcagGAGTTCATGATCCTTCCTACTGGGGCCGCTTCATTCAAGGAGGCCATGAAGATGGGTGTTGAAGTGTACCACAACCTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG