1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaggtcacaagcaactaatcttgccattttattccaatccaatttgttgtattgctgaatagtagaaactgtggtttacatttttacattgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGGGTCAGTTTGTTCGGCAAGATCATGGTGTCCAAGGGAGCTAGGGCTGTC
species | Oryza sativa |
transcript | LOC_Os09g36220.2 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|218483292|gb|FG957305.1|FG957305
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29683100|gb|CB679375.1|CB679375
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|58690423|gb|CK079110.1|CK079110
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|109712663|gb|CI105271.1|CI105271
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|89170875|gb|CI040152.1|CI040152
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|86434331|gb|CI094674.1|CI094674
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: TTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29687697|gb|CB683972.1|CB683972
genomic: TTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|86887570|gb|CI294204.1|CI294204
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29679637|gb|CB675912.1|CB675912
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29657708|gb|CB653983.1|CB653983
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAAEST: gi|58608805|gb|CK036838.1|CK036838
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|11564750|gb|AU165386.1|AU165386
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|86858658|gb|CI273174.1|CI273174
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29645694|gb|CB650701.1|CB650701
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|163921042|gb|EG710418.1|EG710418
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|86873077|gb|CI328457.1|CI328457
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: GTGC-TTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29670837|gb|CB667112.1|CB667112
genomic: GTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29678108|gb|CB674383.1|CB674383
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29640755|gb|CB645762.1|CB645762
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|86870854|gb|CI326685.1|CI326685
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|88262027|gb|CI365603.1|CI365603
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGA-GAAAGACAGGTGC-TTGA-AAGAAG GTGCGATACCAGAGCA-GAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|88828782|gb|CI073652.1|CI073652
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: TGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29657709|gb|CB653984.1|CB653984
genomic: TGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|38481670|gb|CF965759.1|CF965759
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|88266360|gb|CI377262.1|CI377262
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: GTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAACCTACTAGCCGAGCAGCGACCCCGGGTTAAGEST: gi|2797244|gb|AA750538.1|AA750538
genomic: GTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: GGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29638276|gb|CB643285.1|CB643285
genomic: GGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|86886538|gb|CI322770.1|CI322770
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGA-GAAAGACAGGTGCTTTGAGAAGAA- GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|88249085|gb|CI248934.1|CI248934
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: AGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|86425805|gb|CI070902.1|CI070902
genomic: AGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|58692834|gb|CK081521.1|CK081521
genomic: CGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|8856742|gb|AU094060.1|AU094060
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29662771|gb|CB659046.1|CB659046
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|88962830|gb|CI023930.1|CI023930
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|89168836|gb|CI020917.1|CI020917
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|86850833|gb|CI338809.1|CI338809
genomic: CTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: AAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29645662|gb|CB650669.1|CB650669
genomic: AAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|86500501|gb|CI143134.1|CI143134
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|27546169|gb|CA764459.2|CA764459
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|88727695|gb|CI749497.1|CI749497
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29634227|gb|CB639236.1|CB639236
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|88995618|gb|CI022941.1|CI022941
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: GTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29678660|gb|CB674935.1|CB674935
genomic: GTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|88250738|gb|CI348968.1|CI348968
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: GACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|14981126|gb|BI305817.1|BI305817
genomic: GACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29631665|gb|CB636674.1|CB636674
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|218505001|gb|FG965451.1|FG965451
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29679592|gb|CB675867.1|CB675867
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATCCCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|86870323|gb|CI319429.1|CI319429
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: ACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29656077|gb|CB652352.1|CB652352
genomic: ACTGAACAAGTTCCGGCTTAAGAGGAAAGACA-GGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTEST: gi|29640084|gb|CB645093.1|CB645093
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGT
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|58593766|gb|CF992074.1|CF992074
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGEST: gi|29659338|gb|CB655613.1|CB655613
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
EST: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAG GTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
genomic: CACTGAACAAGTTCCGGCTTAAGAGGAAAGACAGGTGCTTTGAGAAGAAGgtaggtcaca ... tgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAG
tgttgtattgctgaatagtagaaactgtggtttacatttttacattgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGGGTCAGTTTGTTCGGCAAGATCATGGTGTCCAAGGGAGCTAGGGCTGTC
tttacatttttacatt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaggtcacaagcaactaatcttgccattttattccaatccaatttgttgtattgctgaatagtagaaactgtggtttacatttttacattgctgtgcagGTGCGATACCAGAGCAGGAAGCTACTAGCCGAGCAGCGACCGCGGGTTAAGGGTCAGTTTGTTCGGCAAGATCATGGTGTCCAAGGGAGCTAGGGCTGTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT