1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtacctctttttttttcttcttttacctatataattctagataactgacatcacaaaagatggtaacattccccttttttttgcagCTTTCTGGCCTCATGCATACACCTTCCAGCTAGCGGAGGCCTCGCGCAACAATAACACCGCAAACTCCTACAGCGTGAGACCGACCGGGTTCGAGACTGT
species | Oryza sativa |
transcript | LOC_Os09g13870.3 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: TTTTGTTATCTGCAATTCTTCCCATATCCTTATGACGCAGACG CTTTCTGGCCTCATGCATACACCTTCCAGCTAGCGGAGGCCTCGCGCAACAEST: gi|33666578|gb|CF297545.1|CF297545
genomic: TTTTGTTATCTGCAATTCTTCCCATATCCTTATGACGCAGACGgtacctcttt ... ttttttgcagCTTTCTGGCCTCATGCATACACCTTCCAGCTAGCGGAGGCCTCGCGCAACA
EST: CGCATCATTTTGTTATCTGCAATTCTTCCCATATCCTTATGACGCAGACG CTTTCTGGCCTCATGCATACACCTTCCAGCTAGCGGAGGCCTCGCGCAACAEST: gi|88220376|gb|CI219936.1|CI219936
genomic: CGCATCATTTTGTTATCTGCAATTCTTCCCATATCCTTATGACGCAGACGgtacctcttt ... ttttttgcagCTTTCTGGCCTCATGCATACACCTTCCAGCTAGCGGAGGCCTCGCGCAACA
EST: CGCATCATTTTGTTATCTGCAATTCTTCCCATATCCTTATGACGCAGACG CTTTCTGGCCTCATGCATACACCTTCCAGCTAGCGGAGGCCTCGCGCAACA
genomic: CGCATCATTTTGTTATCTGCAATTCTTCCCATATCCTTATGACGCAGACGgtacctcttt ... ttttttgcagCTTTCTGGCCTCATGCATACACCTTCCAGCTAGCGGAGGCCTCGCGCAACA
taattctagataactgacatcacaaaagatggtaacattccccttttttttgcagCTTTCTGGCCTCATGCATACACCTTCCAGCTAGCGGAGGCCTCGCGCAACAATAACACCGCAAACTCCTACAGCGTGAGACCGACCGGGTTCGAGACTGT
tggtaac putative branch site (score: 2)
cattcccctttttttt CT-rich tract
tttttttt TA-rich tract