1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' |
gtaagtctcaagccattgttttcttcttttttttttcttgcctattcaaatttgttaggatctaaatttgcctttgtagGAATTCATTGCTACTCAAAATAGGCCAAAGACAACAAGAGTAACCCGAGTGATTCAAGGGTACGAGAATCATACATTCAAGTCTAAGTTTGAATCATGGC
species | Oryza sativa |
transcript | LOC_Os03g24220.3 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: GTCGACTAACACAAGTGGAGGAGAGAAAAGCTGCAAGTGCAGCAGTTGAG GAATTCATTGCTACTCAAAATAGGCCAAAGACAACAAGAGTAACCCGAGTGEST: gi|11442605|gb|BF430508.1|BF430508
genomic: GTCGACTAACACAAGTGGAGGAGAGAAAAGCTGCAAGTGCAGCAGTTGAGgtaagtctca ... gcctttgtagGAATTCATTGCTACTCAAAATAGGCCAAAGACAACAAGAGTAACCCGAGTG
EST: GTCGACTAACACAAGTGGAGGAGAGAAAAGCTGCAAGTGCAGCAGTTGAG GAATTCATTGCTACTCAAAATAEST: gi|58670145|gb|CK058831.1|CK058831
genomic: GTCGACTAACACAAGTGGAGGAGAGAAAAGCTGCAAGTGCAGCAGTTGAGgtaagtctca ... gcctttgtagGAATTCATTGCTACTCAAAATA
EST: GTCGACTAACACAAGTGGAGGAGAGAAAAGCTGCAAGTGCAGCAGTTGAG GAATTCATTGCTACTCAAAATAGGCCAAAGACAACAAGAGTAACCCGAGTG
genomic: GTCGACTAACACAAGTGGAGGAGAGAAAAGCTGCAAGTGCAGCAGTTGAGgtaagtctca ... gcctttgtagGAATTCATTGCTACTCAAAATAGGCCAAAGACAACAAGAGTAACCCGAGTG
tcttttttttttcttgcctattcaaatttgttaggatctaaatttgcctttgtagGAATTCATTGCTACTCAAAATAGGCCAAAGACAACAAGAGTAACCCGAGTGATTCAAGGGTACGAGAATCATACATTCAAGTCTAAGTTTGAATCATGGC
atctaaa putative branch site (score: 3)
tttgccttt CT-rich tract
tattcaaatttgtta TA-rich tract