1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaaacccttattgctttccctgccttaatccccattttttggtcccaaaatgttcctatcactaatatcaatgtgatagtaactcagGTTCTGACAACTAGTATTTGCTCCGCGTGGTTCTTGAGCGTGGAGATAGGGCTCACCTGATCCTTGTGGCAGTAAATATCCATGCGCGACAGGAACAAGT
species | Oryza sativa |
transcript | LOC_Os03g14510.2 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: AATCATACCTGTATTTCGTGCCCTTTTGAGGTGATCAAGCTTCCCGCATG GTTCTGACAACTAGTATTTGCTCCGCGTGGTTCTTGAGCGTGGAGATAGGGEST: gi|86832619|gb|CI345053.1|CI345053
genomic: AATCATACCTGTATTTCGTGCCCTTTTGAGGTGATCAAGCTTCCCGCATGgtaaaccctt ... agtaactcagGTTCTGACAACTAGTATTTGCTCCGCGTGGTTCTTGAGCGTGGAGATAGGG
EST: AATCATACCTGTATTTCGTGCCCTTTTGAGGTGATCAAGCTTCCCGCATGTAACTCAG
genomic: AATCATACCTGTATTTCGTGCCCTTTTGAGGTGATCAAGCTTCCCGC-----A-T--Ggtaaaccctt ... agt
cattttttggtcccaaaatgttcctatcactaatatcaatgtgatagtaactcagGTTCTGACAACTAGTATTTGCTCCGCGTGGTTCTTGAGCGTGGAGATAGGGCTCACCTGATCCTTGTGGCAGTAAATATCCATGCGCGACAGGAACAAGT
tagtaac putative branch site (score: 19)
taatatcaat TA-rich tract