1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaaacccttattgctttccctgccttaatccccattttttggtcccaaaatgttcctatcactaatatcaatgtgatagTAACTCAGGTTCTGACAACTAGTATTTGCTCCGCGTGGTTCTTGAGCGTGGAGATAGGGCTCACCTGATCCTTGTGGCAGTAAATATCCATGCGCGACAG
species | Oryza sativa |
transcript | LOC_Os03g14510.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: AATCATACCTGTATTTCGTGCCCTTTTGAGGTGATCAAGCTTCCCGCATG TAACTCAGGTTCTGACAACTAGTATTTGCTCCGCGTGGTTCTTGAGCGTGGEST: gi|88963934|gb|CI032851.1|CI032851
genomic: AATCATACCTGTATTTCGTGCCCTTTTGAGGTGATCAAGCTTCCCGCATGgtaaaccctt ... aatgtgatagTAACTCAGGTTCTGACAACTAGTATTTGCTCCGCGTGGTTCTTGAGCGTGG
EST: AATCATACCTGTATTTCGTGCCCTTTTGAGGTGATCAAGCTTCCCGC--- --A-T--GGTTCTGACAACTAGTATTTGCTCCGCGTGGTTCTTGAGCGTGGEST: gi|88509048|gb|CI436554.1|CI436554
genomic: AATCATACCTGTATTTCGTGCCCTTTTGAGGTGATCAAGCTTCCCGCATGgtaaaccctt ... aatgtgatagTAACTCAGGTTCTGACAACTAGTATTTGCTCCGCGTGGTTCTTGAGCGTGG
EST: AATCATACCTGTATTTCGTGCCCTTTTGAGGTGATCAAGCTTCCCGCATG TAACTCAGGTTCTGACAACTAGTATTTGCTCCGCGTGGTTCTTGAGGGTGGEST: gi|88481011|gb|CI418282.1|CI418282
genomic: AATCATACCTGTATTTCGTGCCCTTTTGAGGTGATCAAGCTTCCCGCATGgtaaaccctt ... aatgtgatagTAACTCAGGTTCTGACAACTAGTATTTGCTCCGCGTGGTTCTTGAGCGTGG
EST: AATCATACCTNTATTTCGTGCCCTTTTGAGGTGATCAAGCTTCCCGCATG TAACTCAGGTTCTGACAACTANTATTTGCTCCGCGTGGTTCTTGAGCGTGG
genomic: AATCATACCTGTATTTCGTGCCCTTTTGAGGTGATCAAGCTTCCCGCATGgtaaaccctt ... aatgtgatagTAACTCAGGTTCTGACAACTAGTATTTGCTCCGCGTGGTTCTTGAGCGTGG
ttaatccccattttttggtcccaaaatgttcctatcactaatatcaatgtgatagTAACTCAGGTTCTGACAACTAGTATTTGCTCCGCGTGGTTCTTGAGCGTGGAGATAGGGCTCACCTGATCCTTGTGGCAGTAAATATCCATGCGCGACAG
cactaat putative branch site (score: 2)
taatatcaat TA-rich tract