1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtgatcatctacattaggcaatactgaactcctgtttctacattaccgaaagttagaagcaaacatgtcccatttatgttggcagttactttaaccaaaattttgtttgcatggatcaacagGCTACAATTATGAGGCCTGCAACTATGATTGGCACAGAAGATCGGATTTTGAATAGATGGGCACAGTTTGCCAAAAATTGGGGTTTCCTCCCTCTTGTTG
species | Oryza sativa |
transcript | LOC_Os02g57180.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: TGAGGGCCAAGGCTGCTGGGGAGGAATCTGTGTTGAAAGAATTTCCTGAG GCTACAATTATGAGGCCTGCAACTATGATTGGCACAGAAGATCGGATTTTGEST: gi|58690755|gb|CK079442.1|CK079442
genomic: TGAGGGCCAAGGCTGCTGGGGAGGAATCTGTGTTGAAAGAATTTCCTGAGgtgatcatct ... ggatcaacagGCTACAATTATGAGGCCTGCAACTATGATTGGCACAGAAGATCGGATTTTG
EST: TGAGGGCCAAGGCTGCTGGGGAGGAATCTGTGTTGAAAGAATTTCCTGAG GCTACAATTATGAGGCCTGCAACTATGATTGGCACAGAAGATCGGATTTTGEST: gi|29673108|gb|CB669383.1|CB669383
genomic: TGAGGGCCAAGGCTGCTGGGGAGGAATCTGTGTTGAAAGAATTTCCTGAGgtgatcatct ... ggatcaacagGCTACAATTATGAGGCCTGCAACTATGATTGGCACAGAAGATCGGATTTTG
EST: TGAGGGCCAAGGCTGCTGGGGAGGAATCTGTGTTGAAAGAATTTCCTGAG GCTACAATTATGAGGCCTGCAACTATGATTGGCACAGAAGATCGGATTTTGEST: gi|29671358|gb|CB667633.1|CB667633
genomic: TGAGGGCCAAGGCTGCTGGGGAGGAATCTGTGTTGAAAGAATTTCCTGAGgtgatcatct ... ggatcaacagGCTACAATTATGAGGCCTGCAACTATGATTGGCACAGAAGATCGGATTTTG
EST: TGAGGGCCAAGGCTGCTGGGGAGGAATCTGTGTTGAAAGAATTTCCTGAG GCTACAATTATGAGGCCTGCAACTATGATTGGCACAGAAGATCGGATTTTGEST: gi|58597371|gb|CK007899.1|CK007899
genomic: TGAGGGCCAAGGCTGCTGGGGAGGAATCTGTGTTGAAAGAATTTCCTGAGgtgatcatct ... ggatcaacagGCTACAATTATGAGGCCTGCAACTATGATTGGCACAGAAGATCGGATTTTG
EST: TGAGGGCCAANGCTGCTGGGGAGGAATCTGTGTTGAAAGAATTTCCTGAG GCTACAATTATEST: gi|29671359|gb|CB667634.1|CB667634
genomic: TGAGGGCCAAGGCTGCTGGGGAGGAATCTGTGTTGAAAGAATTTCCTGAGgtgatcatct ... ggatcaacagGCTACAATTAT
EST: CTGCTGGGGAGGAATCTGTGTTGAAAGAATTTCCTGAG GCTACAATTATGAGGCCTGCAACTATGATTGGCACAGAAGATCGGATTTTG
genomic: CTGCTGGGGAGGAATCTGTGTTGAAAGAATTTCCTGAGgtgatcatct ... ggatcaacagGCTACAATTATGAGGCCTGCAACTATGATTGGCACAGAAGATCGGATTTTG
tcccatttatgttggcagttactttaaccaaaattttgtttgcatggatcaacagGCTACAATTATGAGGCCTGCAACTATGATTGGCACAGAAGATCGGATTTTGAATAGATGGGCACAGTTTGCCAAAAATTGGGGTTTCCTCCCTCTTGTTG
ctttaac putative branch site (score: 63)
tttaaccaaaatttt TA-rich tract