1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gttggcttcttagatgcaaatgctaataatttttgttgaatgtcgtgtgatgttcctagtttgctgtctcatgtcatctaaccttaacttttttctaactttgtcagGCGAACAGTGAGCATCCTCTATCAAAGGCTATTGTAGAGTACACAAAGAAGCTCAGGGAACAATATGGATCTCACAGTGACCATATAATGGAGTCCAAGG
species | Oryza sativa |
transcript | LOC_Os02g10290.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: TCTCCAAGATACCGCTACTAGAGCTGTGTGATTTGGCTGCTGGTGCAGAG GCGAACAGTGAGCATCCTCTATCAAAGGCTATTGTAGAGTACACAAAGAAGEST: gi|29664512|gb|CB660787.1|CB660787
genomic: TCTCCAAGATACCGCTACTAGAGCTGTGTGATTTGGCTGCTGGTGCAGAGgttggcttct ... actttgtcagGCGAACAGTGAGCATCCTCTATCAAAGGCTATTGTAGAGTACACAAAGAAG
EST: TCTCCAAGATACCGCTACTAGAGCTGTGTGATTTGGCTGCTGGTGCAGAG GCGAACAGTGAGCATCCTCTATCAAAGGCTATTGTAGAGTACACAAAGAAGEST: gi|29637742|gb|CB642751.1|CB642751
genomic: TCTCCAAGATACCGCTACTAGAGCTGTGTGATTTGGCTGCTGGTGCAGAGgttggcttct ... actttgtcagGCGAACAGTGAGCATCCTCTATCAAAGGCTATTGTAGAGTACACAAAGAAG
EST: TCTCCAAGATACCGCTACTAGAGCTGTGTGATTTGGCTGCTGGTGCAGAG GCGAACAGTGAGCATCCTCTATCAAAGGCTATTGTAGAGTACACAAAGAAGEST: gi|58687103|gb|CK075790.1|CK075790
genomic: TCTCCAAGATACCGCTACTAGAGCTGTGTGATTTGGCTGCTGGTGCAGAGgttggcttct ... actttgtcagGCGAACAGTGAGCATCCTCTATCAAAGGCTATTGTAGAGTACACAAAGAAG
EST: TCTCCAAGATACCGCTACTAGAGCTGTGTGATTTGGCTGCTGGTGCAGAG GCGAACAGTGAGCATCCTCTATCAAAGGCTATTGTAGAGTACACAAAGAAGEST: gi|29680252|gb|CB676527.1|CB676527
genomic: TCTCCAAGATACCGCTACTAGAGCTGTGTGATTTGGCTGCTGGTGCAGAGgttggcttct ... actttgtcagGCGAACAGTGAGCATCCTCTATCAAAGGCTATTGTAGAGTACACAAAGAAG
EST: TCTCCAAGATACCGCTACTAGAGCTGTGTGATTTGGCTGCTGGTGCAGAG GCGAACAGTGAGCATCCTCTATCAAAGGCTATTGTAGAGTACACAAAGAAG
genomic: TCTCCAAGATACCGCTACTAGAGCTGTGTGATTTGGCTGCTGGTGCAGAGgttggcttct ... actttgtcagGCGAACAGTGAGCATCCTCTATCAAAGGCTATTGTAGAGTACACAAAGAAG
ttcctagtttgctgtctcatgtcatctaaccttaacttttttctaactttgtcagGCGAACAGTGAGCATCCTCTATCAAAGGCTATTGTAGAGTACACAAAGAAGCTCAGGGAACAATATGGATCTCACAGTGACCATATAATGGAGTCCAAGG
ttctaac putative branch site (score: 13)
cttttttctaacttt CT-rich tract
ttaacttttttctaa TA-rich tract