1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
...tgataagggtttgctcactatgtcaatttaagttgctcttcgcacgtttagaaaagagaacttttagttgatagtaatgcattgttgtgctccatgatagGTATTACATCCACAATCTATGAGACCTGCTAGAGAAGGTGATATACCAGTCAGGGTTAAGAATTCGTACAACCCTAAAGCTCCAGGCACCCTGATCACTA
species | Oryza sativa |
transcript | LOC_Os01g70300.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: CATACTTAACATTTGAAGAGGCAGCAGAACTTGCTTATTTTGGTGCCCAG GTATTACATCCACAATCTATGAGACCTGCTAGAGAAGGTGATATACCAGTCEST: gi|29669913|gb|CB666188.1|CB666188
genomic: CATACTTAACATTTGAAGAGGCAGCAGAACTTGCTTATTTTGGTGCCCAGgtatgtattc ... tccatgatagGTATTACATCCACAATCTATGAGACCTGCTAGAGAAGGTGATATACCAGTC
EST: CATACTTAACATTTGAAGAGGCAGCAGAACTTGCTTATTTTGGTGCCCAG GTATTACATCCACAATCTATGAGACCTGCTAGAGAAGGTGATATACCAGTC
genomic: CATACTTAACATTTGAAGAGGCAGCAGAACTTGCTTATTTTGGTGCCCAGgtatgtattc ... tccatgatagGTATTACATCCACAATCTATGAGACCTGCTAGAGAAGGTGATATACCAGTC
gtttagaaaagagaacttttagttgatagtaatgcattgttgtgctccatgatagGTATTACATCCACAATCTATGAGACCTGCTAGAGAAGGTGATATACCAGTCAGGGTTAAGAATTCGTACAACCCTAAAGCTCCAGGCACCCTGATCACTA
agttgat putative branch site (score: 5)
aactttta TA-rich tract