1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtgagaatcttttttagaacatatatacacactatgctccattccgtgttgaactgttgattggtcggctaagggtaacttctgttctatttttactcagGACTGGTCTGGGCAGAGTGCAAGCAAAATTGCATCCGAGATTTGCGGATTTCTGACAGTTCTTGCTGGTACTCTTGTGCTACACTCTACTAGAGAACCTG
species | Oryza sativa |
transcript | LOC_Os01g65310.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: ATGCCATGTTCACAACCCTCACTATTTTAGCAAGTGCGATAATGTTCAAG GACTGGTCTGGGCAGAGTGCAAGCAAAATTGCATCCGAGATTTGCGGATTTEST: gi|87029382|gb|CI250315.1|CI250315
genomic: ATGCCATGTTCACAACCCTCACTATTTTAGCAAGTGCGATAATGTTCAAGgtgagaatct ... ttttactcagGACTGGTCTGGGCAGAGTGCAAGCAAAATTGCATCCGAGATTTGCGGATTT
EST: ATGCCATGTTCACAACCCTCACTATTTTAGCAAGTGCGATAATGTTCAAG GACTGGTCTGGGCAGAGTGCAAGCAAAATTGCATCCGAGATTTGCGGATTTEST: gi|29676149|gb|CB672424.1|CB672424
genomic: ATGCCATGTTCACAACCCTCACTATTTTAGCAAGTGCGATAATGTTCAAGgtgagaatct ... ttttactcagGACTGGTCTGGGCAGAGTGCAAGCAAAATTGCATCCGAGATTTGCGGATTT
EST: ATGCCATGTTCACAACCCTCACTATTTTAGCAAGTGCGATAATGTTCAAG GACTGGTCTGGGCAGAGTGCAAGCAAAATTGCATCCGAGATTTGCGGATTTEST: gi|218484594|gb|FG954369.1|FG954369
genomic: ATGCCATGTTCACAACCCTCACTATTTTAGCAAGTGCGATAATGTTCAAGgtgagaatct ... ttttactcagGACTGGTCTGGGCAGAGTGCAAGCAAAATTGCATCCGAGATTTGCGGATTT
EST: ATGCCATGTTCACAACCCTCACTATTTTAGCAAGTGCGATAATGTTCAAG GACTGGTCTGGGCAGAGTGCAAGCAAAATTGCATCCGAGATTTGCGGATTT
genomic: ATGCCATGTTCACAACCCTCACTATTTTAGCAAGTGCGATAATGTTCAAGgtgagaatct ... ttttactcagGACTGGTCTGGGCAGAGTGCAAGCAAAATTGCATCCGAGATTTGCGGATTT
gtgttgaactgttgattggtcggctaagggtaacttctgttctatttttactcagGACTGGTCTGGGCAGAGTGCAAGCAAAATTGCATCCGAGATTTGCGGATTTCTGACAGTTCTTGCTGGTACTCTTGTGCTACACTCTACTAGAGAACCTG
gggtaac putative branch site (score: 14)
cttctgttctattttt CT-rich tract
ttctattttta TA-rich tract