1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...ttcttctagaccttttagccaatggaaccatttcttttttttcctcccctttgaaaatataagcttccctggttctgatgttttttgcttcatctaacagGTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTCATGATTCATACATTCTTCCTGATGTATCATTCAGCGACCACAGTCCAAT
species | Oryza sativa |
transcript | LOC_Os01g58690.3 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: GCTTTCGG-TATACCTTCTGGGGTGAAAATCAGGCGCATAACCAACAAAG G-TGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTCEST: gi|86430432|gb|CI082855.1|CI082855
genomic: GCTGTCGGCTATACCTTCTGGGGTGAAAATCA-GCGCATAACCAACAAAGgtcagtacat ... catctaacagGTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTC
EST: TGCTGTCGGCTATACCTTCTGGGGTGAAAATCAGCGCATAACCAACAAAG GTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATGACCGACAAGGTTCEST: gi|86420470|gb|CI056459.1|CI056459
genomic: TGCTGTCGGCTATACCTTCTGGGGTGAAAATCAGCGCATAACCAACAAAGgtcagtacat ... catctaacagGTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTC
EST: TGCTGTCGGCTATACCTTCTGGGGTGAAAATCAGCGCATAACCAACAAAG GTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTCEST: gi|66928154|gb|CX115002.1|CX115002
genomic: TGCTGTCGGCTATACCTTCTGGGGTGAAAATCAGCGCATAACCAACAAAGgtcagtacat ... catctaacagGTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTC
EST: TGCTGTCGGCTATACCTTCTGGGGTG-AAATCAGCGCATAACCAACAAAG GTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTCEST: gi|66927262|gb|CX114110.1|CX114110
genomic: TGCTGTCGGCTATACCTTCTGGGGTGAAAATCAGCGCATAACCAACAAAGgtcagtacat ... catctaacagGTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTC
EST: GCTGTCGG-TAATACCTTCTGGGGTGAAAATCAGGGCATA-CCAACAAAT GTGGGAGATTAGAATTACTT-CTTGGGTCGGAATCTATTACCGEST: gi|8528070|gb|AU092885.1|AU092885
genomic: GCTGTCGGCTA-TACCTTCTGGGGTGAAAATCAGCGCATAACCAACAAAGgtcagtacat ... catctaacagGTTGGCGATTAGA-TTACTTTCTTGCGTCGGAATCTATTACCG
EST: TGCTGTCGGCTATACCTTCTGGGGTGAAAATCAGCGCATAACCAACAAAG GTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTCEST: gi|86536931|gb|CI177137.1|CI177137
genomic: TGCTGTCGGCTATACCTTCTGGGGTGAAAATCAGCGCATAACCAACAAAGgtcagtacat ... catctaacagGTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTC
EST: TGCTGTCGGCTATACCTTCTGGGGTGAAAATCAGCGCATAACCAACAAAG GTTGGCGATTTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTEST: gi|88267158|gb|CI379093.1|CI379093
genomic: TGCTGTCGGCTATACCTTCTGGGGTGAAAATCAGCGCATAACCAACAAAGgtcagtacat ... catctaacagGTTGGCGA-TTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTT
EST: TTCTGTCGGCTATACCTTCTGGGGTGAAAATCAGCGCATAACCAACAAAG GTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTCEST: gi|88481861|gb|CI419132.1|CI419132
genomic: TGCTGTCGGCTATACCTTCTGGGGTGAAAATCAGCGCATAACCAACAAAGgtcagtacat ... catctaacagGTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTC
EST: TGCTGTCGGCTATACCTTCTGGGGTGAAAATCAGCGCATAACCAACAAAG GTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTCEST: gi|86842271|gb|CI335201.1|CI335201
genomic: TGCTGTCGGCTATACCTTCTGGGGTGAAAATCAGCGCATAACCAACAAAGgtcagtacat ... catctaacagGTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTC
EST: CTTCTGGGGTGAAAATCAGCGCATAACCAACAAAG GTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTCEST: gi|88835940|gb|CI371045.1|CI371045
genomic: CTTCTGGGGTGAAAATCAGCGCATAACCAACAAAGgtcagtacat ... catctaacagGTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTC
EST: TGCTGTCGGCTATACCTTCTGGGGTGAAAATCAGCGCATAACCAACAAAG GTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTC
genomic: TGCTGTCGGCTATACCTTCTGGGGTGAAAATCAGCGCATAACCAACAAAGgtcagtacat ... catctaacagGTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTC
cccctttgaaaatataagcttccctggttctgatgttttttgcttcatctaacagGTTGGCGATTAGATTACTTTCTTGCGTCGGAATCTATTACCGACAAGGTTCATGATTCATACATTCTTCCTGATGTATCATTCAGCGACCACAGTCCAAT
ttctgat putative branch site (score: 3)
ttttttgcttcatct CT-rich tract
ttgaaaatataa TA-rich tract