1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgagtcatgcctaatcaactgatgtcacagttttttttctgcatgaatacctttactctgaaaagctgtctatccaggtgttcatgcctaatcaatactgtctctgttttcagAAAAAGAAGCCTAGCCACTGATGTCAGAGTTTGCCGAATGCCAGGTTTGCGTCTCTTGGTGTGCAGAGTTTTTTGTTGTATGCCAGTGTTACTTCTCTTT
species | Oryza sativa |
transcript | LOC_Os01g16680.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: TAGGTCCGACGCTAAAAGTTGGCTTCTGTTACGCAGGATTCAGGATGCCT AAAAAGAAGCCTAGCCACTGATGTCAGAGTTTGCCGAATGCCAGGTTTGCG
genomic: TAGGTCCGACGCTAAAAGTTGGCTTCTGTTACGCAGGATTCAGGATGCCTgtgagtcatg ... ctgttttcagAAAAAGAAGCCTAGCCACTGATGTCAGAGTTTGCCGAATGCCAGGTTTGCG
tgaaaagctgtctatccaggtgttcatgcctaatcaatactgtctctgttttcagAAAAAGAAGCCTAGCCACTGATGTCAGAGTTTGCCGAATGCCAGGTTTGCGTCTCTTGGTGTGCAGAGTTTTTTGTTGTATGCCAGTGTTACTTCTCTTT
gcctaat putative branch site (score: 15)
ctgtctctgttttc putative PPT
taatcaata TA-rich tract