1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gttggtttgaattctccttgatttcccccttattatactatatgtggcgccgctaaagtgctaatgcaatctattctgcacatttccacatcagTTATGATAGGCCCCTCCAATGTGAATAAAAAGCTGTGGCCTCTGTAGAGAAGGCTCGGCGAGGGTGGTGTTTCTCTGCCATCTCAATAAAGCATTCATAG
species | Oryza sativa |
transcript | LOC_Os01g15460.2 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: TTTTTCTGAGCTGAGAGATCTCAGCACAATTTTTCAATCACTTGACACAG TTATGATAGGCCCCTCCAATGTGAATAAAAAGCTGTGGCCTCTGT
genomic: TTTTTCTGAGCTGAGAGATCTCAGCACAATTTTTCAATCACTTGACACAGgttggtttga ... tccacatcagTTATGATAGGCCCCTCCAATGTGAATAAAAAGCTGTGGCCTCTGT
atatgtggcgccgctaaagtgctaatgcaatctattctgcacatttccacatcagTTATGATAGGCCCCTCCAATGTGAATAAAAAGCTGTGGCCTCTGTAGAGAAGGCTCGGCGAGGGTGGTGTTTCTCTGCCATCTCAATAAAGCATTCATAG
tgctaat putative branch site (score: 7)
catttcc putative PPT
aatctatt TA-rich tract