1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...ctcttggggtagatataagtaattgcttgcgtgcatatgattttataactcttgctagctttatttgcttgttcatcacatggttggcaacctgtcacagGTATGGTAATAAGAGGATAGAATCATCAGCTCAACGGCCATTTCCCCCTTCCTTCCGCGTGGTTCACCAACAACCTGTTTACGACAAGAATCCCCAATCC
species | Oryza sativa |
transcript | LOC_Os11g05930.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TTGAATGAGAAAGATATCTTTAATCACTCAAATTCCTCTGCCTTTTCGAG GTATGGTAATAAGAGGATAGAATCATCAGCTCAACGGCCATTTCCCCCTTCEST: gi|29638597|gb|CB643606.1|CB643606
genomic: TTGAATGAGAAAGATATCTTTAATCACTCAAATTCCTCTGCCTTTTCGAGgtactagttt ... cctgtcacagGTATGGTAATAAGAGGATAGAATCATCAGCTCAACGGCCATTTCCCCCTTC
EST: TTGAATGAGAAAGATATCTTTAATCACTCAAATTCCTCTGCCTTTTCGAG GTATGGTAATAAGAGGATAGAATCATCAGCTCAACGGCCATTTCCCCCTTCEST: gi|33382037|gb|CF197380.1|CF197380
genomic: TTGAATGAGAAAGATATCTTTAATCACTCAAATTCCTCTGCCTTTTCGAGgtactagttt ... cctgtcacagGTATGGTAATAAGAGGATAGAATCATCAGCTCAACGGCCATTTCCCCCTTC
EST: TTGAATGAGAAAGATATCTTTAATCACTCAAATTCCTCTGCCTTTTCGAG GTATGGTAATAAGAGGATAGAATCATCAGCTCAACGGCCATTTCCCCCTTC
genomic: TTGAATGAGAAAGATATCTTTAATCACTCAAATTCCTCTGCCTTTTCGAGgtactagttt ... cctgtcacagGTATGGTAATAAGAGGATAGAATCATCAGCTCAACGGCCATTTCCCCCTTC
taactcttgctagctttatttgcttgttcatcacatggttggcaacctgtcacagGTATGGTAATAAGAGGATAGAATCATCAGCTCAACGGCCATTTCCCCCTTCCTTCCGCGTGGTTCACCAACAACCTGTTTACGACAAGAATCCCCAATCC
ttataac putative branch site (score: 2)
tttattt TA-rich tract