1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
...cctttctttattggcagaccatgattattagtttacaacattttttaatgggaattttctagcaatatttgttaatgggcattttctgctatatgtacagGGCCATGGCTTTCGCAAGGAACTACTATACATGCTTTTGGAATTAAAACCACAGTTCCTACGCTTTCCTG
species | Oryza sativa |
transcript | LOC_Os11g03780.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GAATAATTTGGTTTGATCAAGTGTCACTCATGCCTTCAGACACATACAAG GGCCATGGCTTTCGCAAGGAACTACTATACATGCTTTTGGAATTAAAACCAEST: gi|33796277|gb|CF324005.1|CF324005
genomic: GAATAATTTGGTTTGATCAAGTGTCACTCATGCCTTCAGACACATACAAGgttcatcgca ... atatgtacagGGCCATGGCTTTCGCAAGGAACTACTATACATGCTTTTGGAATTAAAACCA
EST: GAATAATTTGGTTTGATCAAGTGTCACTCATGCCTTCAGACACATACAAG GGCCATGGCTTTCGCAAGGAACTACTATACATGCTTTTGGAATTAAAACCAEST: gi|88722894|gb|CI746404.1|CI746404
genomic: GAATAATTTGGTTTGATCAAGTGTCACTCATGCCTTCAGACACATACAAGgttcatcgca ... atatgtacagGGCCATGGCTTTCGCAAGGAACTACTATACATGCTTTTGGAATTAAAACCA
EST: GAATAATTTGGTTTGATCAAGTGTCACTCATGCCTTCAGACACATACAAG GGCCATGGCTTTCGCAAGGAACTACTATACATGCTTTTGGAATTAAAACCA
genomic: GAATAATTTGGTTTGATCAAGTGTCACTCATGCCTTCAGACACATACAAGgttcatcgca ... atatgtacagGGCCATGGCTTTCGCAAGGAACTACTATACATGCTTTTGGAATTAAAACCA
taatgggaattttctagcaatatttgttaatgggcattttctgctatatgtacagGGCCATGGCTTTCGCAAGGAACTACTATACATGCTTTTGGAATTAAAACCACAGTTCCTACGCTTTCCTG
tgttaat putative branch site (score: 3)
aatatttgttaat TA-rich tract